RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 OPRM1P35372 400 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 ECH1Q13011 328 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 UBE2V2Q15819 145 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 MRPL24Q96A35 216 aaKnown RBP13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 ZNF775Q96BV0 537 aaPredicted RBP13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 CLCC1Q96S66 551 aa13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 PNRC2Q9NPJ4 139 aaKnown RBP13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 MCTS1Q9ULC4 181 aaKnown RBP13.32□□□□□ -0.28
SEMA3B-203ENST00000419007 MED19A0JLT2 244 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 CEACAM18A8MTB9 384 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 ANGPTL7O43827 346 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 NME2P1O60361 137 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 TIAF1O95411 115 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 RRADP55042 308 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 FXYD4P59646 89 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 SLC25A47Q6Q0C1 308 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 CA14Q9ULX7 337 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 ANAPC10Q9UM13 185 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 TSPAN15O95858 294 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 CST4P01036 141 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 SNRNP70P08621 437 aaKnown RBP13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 DBHP09172 617 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 MEOX2P50222 304 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 TGIF1Q15583 401 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 LYZL4Q96KX0 146 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 RBM24Q9BX46 236 aaKnown RBP13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 COA4Q9NYJ1 87 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 EDARQ9UNE0 448 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 ZNF850A8MQ14 1090 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 M0R036 132 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 TAAR5O14804 337 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 TLX3O43711 291 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 DIRAS3O95661 229 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 GLAP06280 429 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 S100A6P06703 90 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 LYL1P12980 280 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 SPEM2Q0P670 501 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 BRICD5Q6PL45 260 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 NFAM1Q8NET5 270 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 OR6X1Q8NH79 312 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 FBXO17Q96EF6 278 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 OXGR1Q96P68 337 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 OR6C1Q96RD1 312 aa13.31□□□□□ -0.28
SEMA3B-203ENST00000419007 TTC28Q96AY4 2481 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 XRCC2O43543 280 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 RGS19P49795 217 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 SULT1A2P50226 295 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 NXPH1P58417 271 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 RAB5BP61020 215 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 GRB2P62993 217 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 TAF9Q16594 264 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 GGNBP1Q5YKI7 109 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 DTX1Q86Y01 620 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 ISOC2Q96AB3 205 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 PRRX2Q99811 253 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 EIF5A2Q9GZV4 153 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 IFT22Q9H7X7 185 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 SMCO4Q9NRQ5 59 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 PLA2G2EQ9NZK7 142 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 FAM221AA4D161 298 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 DAOP14920 347 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 KRBOX4Q5JUW0 171 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 TSPO2Q5TGU0 170 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 C20orf196Q8IYI0 205 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 WDR77Q9BQA1 342 aaPredicted RBP13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 GPR173Q9NS66 373 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 MYOTQ9UBF9 498 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 ADAMTS9Q9P2N4 1935 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 SHANK1Q9Y566 2161 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 PRH1P02810 166 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 FCGR3AP08637 254 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 FAM89BQ8N5H3 189 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 OR9K2Q8NGE7 335 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 OR5L2Q8NGL0 311 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 HLA-CQ95604 372 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 ERGIC1Q969X5 290 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 FAAP24Q9BTP7 215 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 PLEK2Q9NYT0 353 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
SEMA3B-203ENST00000419007 FAM230AA0A1W2PPH8 454 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 SERPINE3A8MV23 424 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 JTBO76095 146 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 GLB1P16278 677 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 CSNK1A1P48729 337 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 FHITP49789 147 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 NXT1Q9UKK6 140 aaKnown RBP13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 AMDHD2Q9Y303 409 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 COLCA2A8K830 154 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 SPRY1O43609 319 aaPredicted RBP13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 EIF3GO75821 320 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 APOC1P02654 83 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 OR5H8P0DN80 308 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 DVL1P1P54792 670 aaPredicted RBP13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 MTCP1P56278 107 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 PIGPP57054 158 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 IL15RAQ13261 267 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 ABCA11PQ4W5N1 156 aa13.29□□□□□ -0.28
SEMA3B-203ENST00000419007 MIDNQ504T8 468 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms