RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PIP5KL1Q5T9C9 394 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GLT8D1Q68CQ7 371 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ZNF660Q6AZW8 331 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR5M10Q6IEU7 315 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TCEAL6Q6IPX3 200 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 C3orf33Q6P1S2 294 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FAHD2BQ6P2I3 314 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 FAM199XQ6PEV8 388 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 ZCCHC12Q6PEW1 402 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 C11orf88Q6PI97 169 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 HAGHLQ6PII5 290 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 TMEM220Q6QAJ8 160 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ALKAL2Q6UX46 152 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CXCL17Q6UXB2 119 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 APOOLQ6UXV4 268 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 IL34Q6ZMJ4 242 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 WDR88Q6ZMY6 472 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ABHD13Q7L211 337 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 NDUFAF7Q7L592 441 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FAM122BQ7Z309 247 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FAM220AQ7Z4H9 259 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GTSCR1Q86UQ5 136 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TRAPPC5Q8IUR0 188 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TUSC5Q8IXB3 177 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 NRMQ8IXM6 262 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 KCNRGQ8N5I3 272 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 C12orf45Q8N5I9 185 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 LINC00469Q8N7U9 141 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TMEM99Q8N816 258 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 AMER3Q8N944 861 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PRSS33Q8NF86 280 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 BEST4Q8NFU0 473 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR5D16Q8NGK9 328 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR1J4Q8NGS1 313 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR10K1Q8NGX5 313 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR2L2Q8NH16 312 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR51Q1Q8NH59 317 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ZNF461Q8TAF7 563 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 LGALS14Q8TCE9 139 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RPS4Y2Q8TD47 263 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TNFAIP8L1Q8WVP5 186 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TMEM239Q8WW34 195 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GHSRQ92847 366 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 TCEAL3Q969E4 200 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 EXOSC8Q96B26 276 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 OTUB2Q96DC9 234 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MRPS24Q96EL2 167 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 FAHD2AQ96GK7 314 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 C4orf36Q96KX1 117 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CXorf58Q96LI9 332 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SAMD8Q96LT4 415 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CASD1Q96PB1 797 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MS4A4EQ96PG1 132 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR7D2Q96RA2 312 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CCNL2Q96S94 520 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 CNN2Q99439 309 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 TSNAXQ99598 290 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 C12orf57Q99622 126 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MCHR1Q99705 422 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GPA33Q99795 319 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 EDEM2Q9BV94 578 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 RIOK2Q9BVS4 552 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 PAPOLGQ9BWT3 736 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 SEC11CQ9BY50 192 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CHIAQ9BZP6 476 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MFFQ9GZY8 342 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FXYD6Q9H0Q3 95 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 OR52D1Q9H346 318 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 C1orf198Q9H425 327 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SAV1Q9H4B6 383 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 GLIPR2Q9H4G4 154 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 SRD5A3Q9H8P0 318 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ISG20L2Q9H9L3 353 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 ADGRL4Q9HBW9 690 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MCCC2Q9HCC0 563 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MEPEQ9NQ76 525 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 MRPL17Q9NRX2 175 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 MARCH5Q9NX47 278 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 COA4Q9NYJ1 87 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 CNIH4Q9P003 139 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PIPOXQ9P0Z9 390 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 KLK11Q9UBX7 282 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MTFP1Q9UDX5 166 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 IL20RAQ9UHF4 553 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 GPR132Q9UNW8 380 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 FOXJ3Q9UPW0 622 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ZNF443Q9Y2A4 671 aaPredicted RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 PLEKHA6Q9Y2H5 1048 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MRPS7Q9Y2R9 242 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 CARHSP1Q9Y2V2 147 aaKnown RBP2.19□□□□□ -2.06
VPS41-206ENST00000418457 MOB4Q9Y3A3 225 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 MED31Q9Y3C7 131 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 ZNF780BQ9Y6R6 833 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 V9GY05 133 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 DENND4AQ7Z401 1863 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 PLXND1Q9Y4D7 1925 aa2.19□□□□□ -2.06
VPS41-206ENST00000418457 COL6A3P12111 3177 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 BPTFQ12830 3046 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TP53BP1Q12888 1972 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 MDC1Q14676 2089 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms