RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 NAAAQ02083 359 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 TAF9Q16594 264 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 SP6Q3SY56 376 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 HAGHLQ6PII5 290 aaPredicted RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 SPEM1Q8N4L4 309 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 ZNF799Q96GE5 643 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 SHDQ96IW2 340 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 UBE2ZQ9H832 354 aaPredicted RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 LPAR3Q9UBY5 353 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 FAM230AA0A1W2PPH8 454 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 FAM221AA4D161 298 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 NPIPA2E9PIF3 369 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 NPIPA3F8WFD2 350 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 TNFSF11O14788 317 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 FARS2O95363 451 aaKnown RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 NME2P22392 152 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 TAS2R46P59540 309 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 LSM6P62312 80 aaKnown RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 IL15RAQ13261 267 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 PDCD1Q15116 288 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
HDAC9-208ENST00000417496 SGK3Q96BR1 496 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 AQP10Q96PS8 301 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 CHST5Q9GZS9 411 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 TRIOBPQ9H2D6 2365 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 ZIC3O60481 467 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 IGLV3-1P01715 115 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 NTF4P34130 210 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 LPAR6P43657 344 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 CBX5P45973 191 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 MTCP1P56278 107 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 PCOLCEQ15113 449 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 MRPL14Q6P1L8 145 aaKnown RBP12.65□□□□□ -0.38
HDAC9-208ENST00000417496 HAS2Q92819 552 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 SCGB3A2Q96PL1 93 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 UQCC1Q9NVA1 299 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 V9GYS6 101 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 DHHO43323 396 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 HKR1P10072 659 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 MUC1P15941 1255 aaPredicted RBP12.65□□□□□ -0.38
HDAC9-208ENST00000417496 ZNF708P17019 499 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 CTSSP25774 331 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
HDAC9-208ENST00000417496 HGFACQ04756 655 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 TSPO2Q5TGU0 170 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.65□□□□□ -0.38
HDAC9-208ENST00000417496 BATF2Q8N1L9 274 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 TOMM40LQ969M1 308 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 TAF9BQ9HBM6 251 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 PROK2Q9HC23 129 aa12.65□□□□□ -0.38
HDAC9-208ENST00000417496 C19orf25Q9UFG5 118 aaPredicted RBP12.65□□□□□ -0.38
HDAC9-208ENST00000417496 FIGNL2A6NMB9 653 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 K7ESF4 209 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 TP53I11O14683 189 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 SCGB1D2O95969 90 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 IFNA2P01563 188 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 LYL1P12980 280 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 CPT2P23786 658 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 ADH6P28332 368 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 RPUSD3Q6P087 351 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 TMEM123Q8N131 208 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 ZIC4Q8N9L1 334 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 OR9K2Q8NGE7 335 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 EMG1Q92979 244 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 ULBP2Q9BZM5 246 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 RHOFQ9HBH0 211 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 MMP26Q9NRE1 261 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 C14orf166Q9Y224 244 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 IGKV1-27A0A075B6S5 117 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 A0A0J9YW62 118 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 A0A0U1RQV5 110 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 LOC102725191A0A1B0GVB3 256 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 SERPINE3A8MV23 424 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 MED6O75586 246 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 PRKACAP17612 351 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 THBS4P35443 961 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 RBMXP38159 391 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 CXCL12P48061 93 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 PJVKQ0ZLH3 352 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 CCDC157Q569K6 752 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 SULF2Q8IWU5 870 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 ADAMTS17Q8TE56 1095 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 MRPL24Q96A35 216 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 SRXN1Q9BYN0 137 aa12.64□□□□□ -0.39
HDAC9-208ENST00000417496 PTRH2Q9Y3E5 179 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
HDAC9-208ENST00000417496 CCDC85CA6NKD9 419 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 C9JQL5 133 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 H7C2Y5 167 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 UMODP07911 640 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 ALDH3B1P43353 468 aa12.63□□□□□ -0.39
HDAC9-208ENST00000417496 STARD6P59095 220 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms