RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 CCDC90BQ9GZT6 254 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 MIOXQ9UGB7 285 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 CLEC2DQ9UHP7 191 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 MRM2Q9UI43 246 aaKnown RBP10.68□□□□□ -0.7
LINC00339-202ENST00000416769 IKZF2Q9UKS7 526 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 ERGIC3Q9Y282 383 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 LRP12Q9Y561 859 aa10.68□□□□□ -0.7
LINC00339-202ENST00000416769 NOTCH3Q9UM47 2321 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 A0A0U1RQK1 487 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 CENPVL3A0A0U1RRI6 287 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 A0A1B0GW55 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 F5H5K5 113 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 J3QLW9 94 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 M0R135 149 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 PSMD9O00233 223 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 MAGEB4O15481 346 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-202ENST00000416769 GPR137BO60478 399 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 NDUFA7O95182 113 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-202ENST00000416769 MT-ND2P03891 347 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L2P0CJ85 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L3P0CJ86 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L4P0CJ87 422 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L5P0CJ88 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L6P0CJ89 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L7P0CJ90 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF19P17023 458 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 HSD11B1P28845 292 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 OR12D2P58182 307 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 MRPL28Q13084 256 aaKnown RBP10.67□□□□□ -0.7
LINC00339-202ENST00000416769 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4L9Q6RFH8 374 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DRAM2Q6UX65 266 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 OR13G1Q8NGZ3 307 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 FAM110DQ8TAY7 271 aaPredicted RBP10.67□□□□□ -0.7
LINC00339-202ENST00000416769 HAVCR2Q8TDQ0 301 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF799Q96GE5 643 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 TTTY10Q9BZA0 68 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 MMP27Q9H306 513 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 SP140LQ9H930 580 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 DUX4Q9UBX2 424 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 SNX5Q9Y5X3 404 aa10.67□□□□□ -0.7
LINC00339-202ENST00000416769 IQCF6A8MYZ5 107 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 MYL12BO14950 172 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 CRYBA1P05813 215 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 HTR1AP08908 422 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 ACSM4P0C7M7 580 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 PSMB10P40306 273 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
LINC00339-202ENST00000416769 RGS6P49758 472 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 PRKXP51817 358 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 PROK1P58294 105 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 FAM220AQ7Z4H9 259 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 SPARTQ8N0X7 666 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 SVOPQ8N4V2 548 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF485Q8NCK3 441 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 SPRYD4Q8WW59 207 aaPredicted RBP10.66□□□□□ -0.7
LINC00339-202ENST00000416769 C4orf36Q96KX1 117 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 TECTBQ96PL2 329 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 MND1Q9BWT6 205 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
LINC00339-202ENST00000416769 BABAM2Q9NXR7 383 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 GNG8Q9UK08 70 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 RNF114Q9Y508 228 aa10.66□□□□□ -0.7
LINC00339-202ENST00000416769 A0A087WXM4 84 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 TMEM269A0A1B0GVZ9 245 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 MAGEA13PA6NCF6 341 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 J3QW42 95 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 M0QZ24 198 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 SRSF10O75494 262 aaKnown RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 TUBG1P23258 451 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 CX3CR1P49238 355 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 GBX2P52951 348 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 WNT4P56705 351 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 EMX1Q04741 257 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 ACSM1Q08AH1 577 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 GK2Q14410 553 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF829Q3KNS6 432 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 CCDC58Q4VC31 144 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 OR2G6Q5TZ20 316 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 FDX2Q6P4F2 183 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF773Q6PK81 442 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 COLCA1Q6ZS62 124 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 Q6ZSV7 163 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 ZNF826PQ6ZT77 177 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 NLRC3Q7RTR2 1065 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 PRSS45Q7RTY3 260 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 TSPAN14Q8NG11 270 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 GATAD2BQ8WXI9 593 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 RORBQ92753 470 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 LHX4Q969G2 390 aa10.65□□□□□ -0.7
LINC00339-202ENST00000416769 APOBEC3DQ96AK3 386 aaPredicted RBP10.65□□□□□ -0.7
LINC00339-202ENST00000416769 PELI1Q96FA3 418 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms