RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 OR2AT4A6NND4 320 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 SIGLEC5O15389 551 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 WIPF1O43516 503 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 NDUFB3O43676 98 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 APOL3O95236 402 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 PSG2P11465 335 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 RIDAP52758 137 aaKnown RBP12.39□□□□□ -0.43
UBXN4-203ENST00000416538 GNG3P63215 75 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 ZNF829Q3KNS6 432 aaPredicted RBP12.39□□□□□ -0.43
UBXN4-203ENST00000416538 CEACAM21Q3KPI0 293 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 COMMD2Q86X83 199 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 H1FXQ92522 213 aaKnown RBP12.39□□□□□ -0.43
UBXN4-203ENST00000416538 DUS3LQ96G46 650 aaKnown RBP12.39□□□□□ -0.43
UBXN4-203ENST00000416538 DNTTIP1Q9H147 329 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 SLC25A10Q9UBX3 287 aaPredicted RBP12.39□□□□□ -0.43
UBXN4-203ENST00000416538 PIGLQ9Y2B2 252 aa12.39□□□□□ -0.43
UBXN4-203ENST00000416538 A0A1W2PRD5 423 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 A0A1W2PRF3 423 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 A0A1W2PRM7 423 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 OR5B21A6NL26 309 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 LOC110117498-PIK3R3F6TDL0 507 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 G3V2T6 193 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 SYNGR1O43759 233 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 ZNF254O75437 659 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 DHRS3O75911 302 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 ACAA1P09110 424 aaPredicted RBP12.38□□□□□ -0.43
UBXN4-203ENST00000416538 GLRA1P23415 457 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 CEBPDP49716 269 aaPredicted RBP12.38□□□□□ -0.43
UBXN4-203ENST00000416538 RAG2P55895 527 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 KRTAP10-3P60369 221 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 TAF9Q16594 264 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 LRRC10Q5BKY1 277 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 PLCXD3Q63HM9 321 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 TMEM42Q69YG0 159 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
UBXN4-203ENST00000416538 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
UBXN4-203ENST00000416538 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 TMEM86BQ8N661 226 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 KIR3DL3Q8N743 410 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 ZNRF1Q8ND25 227 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 TEX12Q9BXU0 123 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 GPR173Q9NS66 373 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 SLC22A13Q9Y226 551 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 MMP24Q9Y5R2 645 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 R4GMQ9 66 aa12.38□□□□□ -0.43
UBXN4-203ENST00000416538 A6NIN4 97 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 SLC22A31A6NKX4 558 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 GPR137BO60478 399 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 FASP25445 335 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 IER3P46695 156 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 CAV3P56539 151 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 RIPPLY1Q0D2K3 151 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 ZBTB37Q5TC79 503 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 C1orf146Q5VVC0 180 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 Q6ZSR3 168 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 ELMOD2Q8IZ81 293 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 BATF2Q8N1L9 274 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 CD177Q8N6Q3 437 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 OR51G2Q8NGK0 314 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 OR14K1Q8NGZ2 314 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 C17orf50Q8WW18 174 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 SSMEM1Q8WWF3 244 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 TBX5Q99593 518 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 GABARAPL3Q9BY60 117 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 ZNF696Q9H7X3 374 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 CLN6Q9NWW5 311 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 ZNRD1Q9P1U0 126 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 OAZ3Q9UMX2 235 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 GTF2A1LQ9UNN4 478 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 AP4S1Q9Y587 144 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 TMEM14AQ9Y6G1 99 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 V9GYS6 101 aa12.37□□□□□ -0.43
UBXN4-203ENST00000416538 H3BSH0 61 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 NDUFA7O95182 113 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 ATP6V1B1P15313 513 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 NDUFB7P17568 137 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 GABRA2P47869 451 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 ZNF684Q5T5D7 378 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 BCL2L15Q5TBC7 163 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 ACP7Q6ZNF0 438 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 POC1AQ8NBT0 407 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 TMEM185AQ8NFB2 350 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 OR5A2Q8NGI9 324 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 PRRG3Q9BZD7 231 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 SLITRK2Q9H156 845 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 MOB1AQ9H8S9 216 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 C19orf12Q9NSK7 152 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 ENPP5Q9UJA9 477 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 OR52A1Q9UKL2 312 aa12.36□□□□□ -0.43
UBXN4-203ENST00000416538 VWFP04275 2813 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 A0A1W2PQL4 384 aaPredicted RBP12.35□□□□□ -0.43
UBXN4-203ENST00000416538 PQLC2LA1A4F0 135 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 SAC3D1A6NKF1 404 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 POM121CA8CG34 1229 aa12.35□□□□□ -0.43
UBXN4-203ENST00000416538 ZNF670-ZNF695F2Z2N8 137 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms