RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 H3BNX3 289 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 ARG1P05089 322 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 RPSAP08865 295 aaKnown RBP7.51□□□□□ -1.21
LINC01238-201ENST00000416204 SPARCP09486 303 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 CD24P25063 80 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 NOS3P29474 1203 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 CX3CR1P49238 355 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 CEBPDP49716 269 aaPredicted RBP7.51□□□□□ -1.21
LINC01238-201ENST00000416204 AANATQ16613 207 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 IFI44LQ53G44 452 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 TMEM200BQ69YZ2 307 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 DRAM2Q6UX65 266 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 FAM57BQ71RH2 274 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 CENPVQ7Z7K6 275 aaPredicted RBP7.51□□□□□ -1.21
LINC01238-201ENST00000416204 AQP12AQ8IXF9 295 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 PQLC1Q8N2U9 271 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 LINC00482Q8N8I6 264 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 PROKR2Q8NFJ6 384 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 PYDC1Q8WXC3 89 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 DPF1Q92782 380 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 SGK3Q96BR1 496 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 SLAMF6Q96DU3 332 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 SH3GL1Q99961 368 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF649Q9BS31 505 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 HILPDAQ9Y5L2 63 aa7.51□□□□□ -1.21
LINC01238-201ENST00000416204 TSSC4Q9Y5U2 329 aaPredicted RBP7.51□□□□□ -1.21
LINC01238-201ENST00000416204 TCRBV3S1A0A5B6 114 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 H0YJX3 145 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 F2RL2O00254 374 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 SERPINA1P01009 418 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 GYPBP06028 91 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 H1F0P07305 194 aaKnown RBP7.5□□□□□ -1.21
LINC01238-201ENST00000416204 PSG2P11465 335 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 NCK1P16333 377 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 GLRA1P23415 457 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 OTX1P32242 354 aaPredicted RBP7.5□□□□□ -1.21
LINC01238-201ENST00000416204 HSPA13P48723 471 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 GSK3AP49840 483 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 CAV3P56539 151 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 MS4A2Q01362 244 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC01238-201ENST00000416204 PRDX4Q13162 271 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 DYNC1I2Q13409 638 aaKnown RBP7.5□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF273Q14593 569 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 KLHL12Q53G59 568 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 CASC10Q5T4H9 136 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 OGFRL1Q5TC84 451 aaPredicted RBP7.5□□□□□ -1.21
LINC01238-201ENST00000416204 C18orf65Q6ZTR6 163 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 ZBTB46Q86UZ6 589 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 ZDHHC21Q8IVQ6 265 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 MRPL41Q8IXM3 137 aaKnown RBP7.5□□□□□ -1.21
LINC01238-201ENST00000416204 C11orf42Q8N5U0 333 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 RPS4Y2Q8TD47 263 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 LRGUKQ96M69 825 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF488Q96MN9 340 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 PRR25Q96S07 402 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 KCNJ15Q99712 375 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 MICU1Q9BPX6 476 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 TLNRD1Q9H1K6 362 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 VCXQ9H320 206 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 OR52D1Q9H346 318 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 HEXA-AS1Q9H8Q6 139 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 CMTM6Q9NX76 183 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF319Q9P2F9 582 aa7.5□□□□□ -1.21
LINC01238-201ENST00000416204 hCG_38984A0A1B0GV85 526 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 MAGEA13PA6NCF6 341 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 ANXA2P2A6NMY6 339 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 VGLL3A8MV65 326 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 CXCR6O00574 342 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 GSTA4O15217 222 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 XRCC2O43543 280 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 TIPRLO75663 272 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 GLCEO94923 617 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 LPLP06858 475 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 ACKR3P25106 362 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 LMO1P25800 156 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 SLC6A6P31641 620 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 GPM6AP51674 278 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 RPL31P62899 125 aaKnown RBP7.49□□□□□ -1.21
LINC01238-201ENST00000416204 IL5RAQ01344 420 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 IZUMO2Q6UXV1 221 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 ETV3LQ6ZN32 361 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 CYP4Z1Q86W10 505 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 SPATA24Q86W54 205 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 DHFR2Q86XF0 187 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 SLC15A3Q8IY34 581 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 HPSE2Q8WWQ2 592 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 PIGCQ92535 297 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 SPSB4Q96A44 273 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 RNF170Q96K19 258 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 RTL8AQ9BWD3 113 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 DNTTIP1Q9H147 329 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 Q9H521 79 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 C8orf4Q9NR00 106 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 ACTR3BQ9P1U1 418 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 ZNF222Q9UK12 451 aa7.49□□□□□ -1.21
LINC01238-201ENST00000416204 AP4S1Q9Y587 144 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms