RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 CLN8Q9UBY8 286 aa3.68□□□□□ -1.82
PTPRK-210ENST00000415055 MIOXQ9UGB7 285 aa3.68□□□□□ -1.82
PTPRK-210ENST00000415055 SH3GLB1Q9Y371 365 aa3.68□□□□□ -1.82
PTPRK-210ENST00000415055 LRP12Q9Y561 859 aa3.68□□□□□ -1.82
PTPRK-210ENST00000415055 USH1CQ9Y6N9 552 aa3.68□□□□□ -1.82
PTPRK-210ENST00000415055 DNAH9Q9NYC9 4486 aa3.68□□□□□ -1.82
PTPRK-210ENST00000415055 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 IGHV1-69DA0A0B4J2H0 117 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 IGHV3-64DA0A0J9YX35 117 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CENPVL3A0A0U1RRI6 287 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 A0A1W2PRD5 423 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 A0A1W2PRF3 423 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 A0A1W2PRM7 423 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 C11orf98E9PRG8 122 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CCSO14618 274 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 SURF4O15260 269 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 GLRA3O75311 464 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 DFFBO76075 338 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CPSF4O95639 269 aaKnown RBP3.67□□□□□ -1.82
PTPRK-210ENST00000415055 PAHP00439 452 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 IGHV1-69P01742 117 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 FBP1P09467 338 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 WNT2P09544 360 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 MYL2P10916 166 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 NEFHP12036 1026 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 TCP1P17987 556 aaKnown RBP3.67□□□□□ -1.82
PTPRK-210ENST00000415055 GRPRP30550 384 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CFHR2P36980 270 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 LINC00205P59089 165 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 PAX2Q02962 417 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 SLC36A2Q495M3 483 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 XKR7Q5GH72 579 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 FGD3Q5JSP0 725 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 METTL11BQ5VVY1 283 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 SIGLEC15Q6ZMC9 328 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 COX8CQ7Z4L0 72 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 VRK2Q86Y07 508 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CROCCP3Q8IVE0 287 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF440Q8IYI8 595 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CLECL1Q8IZS7 167 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 LRRC18Q8N456 261 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 SLC22A24Q8N4F4 322 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 KRTCAP2Q8N6L1 136 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF283Q8N7M2 679 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 MAPKAPK5-AS1Q8N8E1 139 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 SPERTQ8NA61 448 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 OR4K5Q8NGD3 323 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 OR4C13Q8NGP0 309 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 OR2T11Q8NH01 316 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 OR2T6Q8NHC8 308 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 MUC7Q8TAX7 377 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 SLC25A40Q8TBP6 338 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 FBXO25Q8TCJ0 367 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 KLF14Q8TD94 323 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-210ENST00000415055 L3HYPDHQ96EM0 354 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 OR2J1Q9GZK6 312 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 CACYBPQ9HB71 228 aaKnown RBP3.67□□□□□ -1.82
PTPRK-210ENST00000415055 VPREB3Q9UKI3 123 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 ELF5Q9UKW6 265 aaPredicted RBP3.67□□□□□ -1.82
PTPRK-210ENST00000415055 UTP11Q9Y3A2 253 aaKnown RBP3.67□□□□□ -1.82
PTPRK-210ENST00000415055 TMED5Q9Y3A6 229 aa3.67□□□□□ -1.82
PTPRK-210ENST00000415055 A0A096LPI6 279 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 LCE6AA0A183 80 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 C5orf49A4QMS7 147 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 NKX6-3A6NJ46 265 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF879B4DU55 563 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 FAAHO00519 579 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 AZIN1O14977 448 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 LSM1O15116 133 aaKnown RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 ATP6V0E1O15342 81 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 SYT7O43581 403 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 MGRN1O60291 552 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 CDK2AP2O75956 126 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 MFN2O95140 757 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 SNAP29O95721 258 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 CYB5R3P00387 301 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 HPRP00739 348 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 DBIP07108 87 aaKnown RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 SNRPAP09012 282 aaKnown RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 CD28P10747 220 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 STOMP27105 288 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 RPL4P36578 427 aaKnown RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 MAGEA12P43365 314 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 GDI2P50395 445 aaKnown RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 BIDP55957 195 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 PPP1CBP62140 327 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 HOXC5Q00444 222 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 CAV1Q03135 178 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 C2orf54Q08AI8 447 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 FUT5Q11128 374 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 GK2Q14410 553 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 LY6EQ16553 131 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 SYPL1Q16563 259 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 PHLDA2Q53GA4 152 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 PABPC1L2AQ5JQF8 200 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 FAM201AQ5SY85 155 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 CEP85LQ5SZL2 805 aa3.66□□□□□ -1.82
PTPRK-210ENST00000415055 WDR25Q64LD2 544 aaPredicted RBP3.66□□□□□ -1.82
PTPRK-210ENST00000415055 OR4F3Q6IEY1 312 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms