RNA–Protein interactions for RNA: ENST00000414301.5

SEMA3F-203, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-203ENST00000414301 ACTR3P61158 418 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 ZNF829Q3KNS6 432 aaPredicted RBP13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 DMRTC1Q5HYR2 192 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 FAHD1Q6P587 224 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 HAGHLQ6PII5 290 aaPredicted RBP13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 GDPGP1Q6ZNW5 385 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 MEPCEQ7L2J0 689 aaKnown RBP13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 OR5K1Q8NHB7 308 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 WFDC12Q8WWY7 111 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 LRTOMTQ8WZ04 291 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 UTP4Q969X6 686 aaKnown RBP13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 CNN2Q99439 309 aaKnown RBP13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 SEMA6AQ9H2E6 1030 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 RASL12Q9NYN1 266 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 ENPP5Q9UJA9 477 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 RNF114Q9Y508 228 aa13.17□□□□□ -0.3
SEMA3F-203ENST00000414301 BTBD17A6NE02 478 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 OR5B21A6NL26 309 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 RNASEK-C17orf49H0YIS7 233 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 M0R1W7 72 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 DYNC1I1O14576 645 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 PRKYO43930 277 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 MTRF1O75570 445 aaKnown RBP13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 PAHP00439 452 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 NRASP01111 189 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 DLX1P56177 255 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 ZBTB37Q5TC79 503 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 PLCXD3Q63HM9 321 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 NCR3LG1Q68D85 454 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 BRICD5Q6PL45 260 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 ZNRF1Q8ND25 227 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 AQP3Q92482 292 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 APOL4Q9BPW4 351 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 TTTY10Q9BZA0 68 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 METTL8Q9H825 291 aaKnown RBP13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 NUFIP1Q9UHK0 495 aaKnown RBP13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 GTF2A1LQ9UNN4 478 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 COPS3Q9UNS2 423 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 MAB21L2Q9Y586 359 aa13.16□□□□□ -0.3
SEMA3F-203ENST00000414301 IGKV1D-17A0A075B6S4 117 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 MEIOCA2RUB1 952 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 PRR32B1ATL7 298 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 G3V2T6 193 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 H0YAE9 185 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 KCNAB3O43448 404 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 FAHP16930 419 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 UBE2E1P51965 193 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 CAPZA1P52907 286 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 CXCR4P61073 352 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 KLRD1Q13241 179 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 ZNF684Q5T5D7 378 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 ZNF322Q6U7Q0 402 aaPredicted RBP13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 BCDIN3DQ7Z5W3 292 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 TCEANCQ8N8B7 351 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 ZSCAN4Q8NAM6 433 aaPredicted RBP13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 TMEM185AQ8NFB2 350 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 CITED1Q99966 193 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 KRT84Q9NSB2 600 aa13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 SF3B6Q9Y3B4 125 aaKnown RBP13.15□□□□□ -0.3
SEMA3F-203ENST00000414301 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 MAGEB4O15481 346 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 MITFO75030 526 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 DHRS3O75911 302 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 IGLV3-1P01715 115 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 EFNB1P98172 346 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 ACSM1Q08AH1 577 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 TAF9Q16594 264 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 ZNF573Q86YE8 665 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 SLC35F2Q8IXU6 374 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 PNKDQ8N490 385 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 OR5D13Q8NGL4 314 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 TMEM163Q8TC26 289 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 SDSLQ96GA7 329 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 MNTQ99583 582 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 ZNRD1Q9P1U0 126 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 ZNF222Q9UK12 451 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 OR52A1Q9UKL2 312 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 R4GMQ9 66 aa13.14□□□□□ -0.31
SEMA3F-203ENST00000414301 TRBV23-1A0A0A0MS06 115 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 RFPL4AA6NLU0 287 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 ZNF670-ZNF695F2Z2N8 137 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 RFPL4AL1F8VTS6 287 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 M0QZ24 198 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 TIMM23O14925 209 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 TTRP02766 147 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 PRDX2P32119 198 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 SAA4P35542 130 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 CLVS2Q5SYC1 327 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 SLX4IPQ5VYV7 408 aa13.13□□□□□ -0.31
SEMA3F-203ENST00000414301 NXNL2Q5VZ03 156 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms