RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NALCNQ8IZF0 1738 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CCDC88BA6NC98 1476 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ARHGEF11O15085 1522 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 A0A087WUU8 490 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TRAV38-1A0A0B4J264 116 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 A0A0U1RQF3 1178 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 A0A1B0GW55 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 A0A1W2PPI3 338 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TSPAN11A1L157 253 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 IFITM5A6NNB3 132 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 FAM166BA8MTA8 275 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 A8MVM7 634 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 IDSB3KWA1 339 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 E5RGE8 158 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 E7EQ34 232 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RPL36A-HNRNPH2H7BZ11 118 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 J3QR06 171 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 J3QRK9 145 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF195O14628 629 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ENSAO43768 121 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 EFNA2O43921 213 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 NRASP01111 189 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CATP04040 527 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 GYPCP04921 128 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ALPLP05186 524 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ADRA2AP08913 450 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 UCHL1P09936 223 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4L2P0CJ85 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4L3P0CJ86 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4L5P0CJ88 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4L6P0CJ89 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4L7P0CJ90 424 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CYP2D6P10635 497 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 GM2AP17900 193 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 IGFBP3P17936 291 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CRHBPP24387 322 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 GJB2P29033 226 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ADORA2AP29274 412 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 PYCR1P32322 319 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OPRD1P41143 372 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 APOBEC1P41238 236 aaKnown RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 GABRA2P47869 451 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OR1E2P47887 323 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 PGGT1BP53609 377 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RIPPLY3P57055 190 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SRYQ05066 204 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF154Q13106 437 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 GNMTQ14749 295 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RHEBQ15382 184 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OR8B8Q15620 311 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SYTL3Q4VX76 610 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ATP6AP1LQ52LC2 224 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TP53I3Q53FA7 332 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SYT14P1Q58G82 188 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 MESTQ5EB52 335 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CLEC12AQ5QGZ9 265 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 HECTD2Q5U5R9 776 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM215Q68D42 235 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DUX4L9Q6RFH8 374 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 IZUMO2Q6UXV1 221 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 C5orf24Q7Z6I8 188 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ARPINQ7Z6K5 226 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 DTX2Q86UW9 622 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 PRIMA1Q86XR5 153 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 FBXO16Q8IX29 292 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SLC35F2Q8IXU6 374 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 PGBD5Q8N414 524 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TMEM86BQ8N661 226 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RNF149Q8NC42 400 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ZNF485Q8NCK3 441 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 B3GALNT2Q8NCR0 500 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 BEST4Q8NFU0 473 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OR52L1Q8NGH7 329 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OR1B1Q8NGR6 318 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OR1L8Q8NGR8 309 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 MCFD2Q8NI22 146 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 VN1R17PQ8TDU5 208 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 FAM151AQ8WW52 585 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SSMEM1Q8WWF3 244 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SLC7A6Q92536 515 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TADA1Q96BN2 335 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ISOC1Q96CN7 298 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 MALSU1Q96EH3 234 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 WDYHV1Q96HA8 205 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 ADTRPQ96IZ2 230 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 FRG2BQ96QU4 278 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 TP53RKQ96S44 253 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 CSF3RQ99062 836 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 AGPAT1Q99943 283 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RASL11BQ9BPW5 248 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 NRIP2Q9BQI9 281 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 PSMG3Q9BT73 122 aaPredicted RBP3.1□□□□□ -1.91
SF3B1-203ENST00000414174 MS4A6AQ9H2W1 248 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 OR51I1Q9H343 314 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 C5orf66Q9H5L9 145 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 RNF167Q9H6Y7 350 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SFXN1Q9H9B4 322 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 SAP30LQ9HAJ7 183 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 KCNJ16Q9NPI9 418 aa3.1□□□□□ -1.91
SF3B1-203ENST00000414174 GPR84Q9NQS5 396 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms