RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DPTQ07507 201 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 MRM1Q6IN84 353 aaKnown RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 Q7L0L9 218 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 ARRDC3Q96B67 414 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-203ENST00000409161 TAAR3PQ9P1P4 343 aa10.96□□□□□ -0.65
SHANK2-203ENST00000409161 A0A1W2PNV4 684 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 TMEM218A2RU14 115 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 SLC22A20A6NK97 555 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF716A6NP11 495 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 AFMIDQ63HM1 303 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 BPIFA4PQ86YQ2 179 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 PERPQ96FX8 193 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 PLXNA1Q9UIW2 1896 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 SIRPB1O00241 398 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 SLC25A1P53007 311 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 RASL12Q9NYN1 266 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 DAPP1Q9UN19 280 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 KLF13Q9Y2Y9 288 aaPredicted RBP10.96□□□□□ -0.66
SHANK2-203ENST00000409161 CYBAP13498 195 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 RPS4Y1P22090 263 aaKnown RBP10.96□□□□□ -0.66
SHANK2-203ENST00000409161 C12orf76Q8N812 135 aaPredicted RBP10.96□□□□□ -0.66
SHANK2-203ENST00000409161 GBF1Q92538 1859 aa10.96□□□□□ -0.66
SHANK2-203ENST00000409161 STRCQ7RTU9 1775 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 GUSBP08236 651 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 SNRPEP62304 92 aaKnown RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 CLPPQ16740 277 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 ERASQ7Z444 233 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 INHBBP09529 407 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 RIGQ13278 110 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 TEX37Q96LM6 180 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 IER2Q9BTL4 223 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 AMMECR1Q9Y4X0 333 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 SLC38A11Q08AI6 406 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 OR5C1Q8NGR4 320 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 MARVELD1Q9BSK0 173 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 PITPNC1Q9UKF7 332 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 RBFOX3A6NFN3 312 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 CRYAAP02489 173 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 TNFRSF1AP19438 455 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 PPICP45877 212 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 NKAIN1Q4KMZ8 207 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 MS4A6EQ96DS6 147 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 DHRS2Q13268 280 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 MZB1Q8WU39 189 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 ZNF646O15015 1829 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 PLXNB2O15031 1838 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 COL5A1-AS1Q5SY13 56 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 RBM45Q8IUH3 476 aaKnown RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 LSM11P83369 360 aaKnown RBP eCLIP10.95□□□□□ -0.66
SHANK2-203ENST00000409161 LINC00303Q3SY05 128 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 OR10A7Q8NGE5 316 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 MAGT1Q9H0U3 335 aa10.95□□□□□ -0.66
SHANK2-203ENST00000409161 COL25A1Q9BXS0 654 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-203ENST00000409161 FRG2CA6NGY1 282 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 HLA-GP17693 338 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 OPRK1P41145 380 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 CTF1Q16619 201 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 RIMKLAQ8IXN7 391 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 OR8D4Q8NGM9 314 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 PRRG2O14669 202 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 JMJD6Q6NYC1 403 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-203ENST00000409161 PROCRQ9UNN8 238 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 FUT7Q11130 342 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 PDPNQ86YL7 162 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 PTGFRP43088 359 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 MYADML2A6NDP7 307 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 SCGB1A1P11684 91 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 ACP1P24666 158 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 BADQ92934 168 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 RNF167Q9H6Y7 350 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 AUNIPQ9H7T9 357 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 HCFC1R1Q9NWW0 138 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 CDC34P49427 236 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-203ENST00000409161 PNLIPRP2P54317 469 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 DLK1P80370 383 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 ACSM5Q6NUN0 579 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 RPS19BP1Q86WX3 136 aaKnown RBP10.94□□□□□ -0.66
SHANK2-203ENST00000409161 NKAIN4Q8IVV8 208 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 OR5AS1Q8N127 324 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 MRPL43Q8N983 215 aaKnown RBP10.94□□□□□ -0.66
SHANK2-203ENST00000409161 RDH5Q92781 318 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 UBE2FQ969M7 185 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 ACY3Q96HD9 319 aa10.94□□□□□ -0.66
SHANK2-203ENST00000409161 SLC2A10O95528 541 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 POU2F2P09086 479 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
SHANK2-203ENST00000409161 DHRS13Q6UX07 377 aa10.93□□□□□ -0.66
SHANK2-203ENST00000409161 SLC36A1Q7Z2H8 476 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms