RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 IKZF1Q13422 519 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 DEFB112Q30KQ8 113 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 HAGHLQ6PII5 290 aaPredicted RBP7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 Q6YL49 198 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 PLEKHG7Q6ZR37 379 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 C1orf122Q6ZSJ8 110 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 MOB3CQ70IA8 216 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 ELMOD2Q8IZ81 293 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 FAM216BQ8N7L0 139 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 YIPF7Q8N8F6 280 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 LY6G5BQ8NDX9 201 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 OR51G2Q8NGK0 314 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 OR4F5Q8NH21 305 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 TRUB1Q8WWH5 349 aaKnown RBP7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 H1FXQ92522 213 aaKnown RBP7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 RPL3LQ92901 407 aaKnown RBP7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 LHX4Q969G2 390 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 DUX5Q96PT3 197 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 IL4I1Q96RQ9 567 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 TBX15Q96SF7 602 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 CIB1Q99828 191 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 OR51I2Q9H344 312 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 DPAGT1Q9H3H5 408 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 RIBC2Q9H4K1 309 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 ADGRL4Q9HBW9 690 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 IMPAD1Q9NX62 359 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 OR52A1Q9UKL2 312 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 SLC7A11Q9UPY5 501 aa7.51□□□□□ -1.21
SNORD88A-201ENST00000408314 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 PSMD9O00233 223 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 AKR7A2O43488 359 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 MITFO75030 526 aaPredicted RBP7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 PAHP00439 452 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 SERPINA3P01011 423 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 TTRP02766 147 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 SFTPBP07988 381 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 RPSAP08865 295 aaKnown RBP7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 ACAA1P09110 424 aaPredicted RBP7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 FAHP16930 419 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 NDUFB7P17568 137 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 GABRA2P47869 451 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 CAPZA1P52907 286 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 HCCSP53701 268 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 EFNB1P98172 346 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 CEP78Q5JTW2 689 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 MEDAGQ5VYS4 303 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 CCDC121Q6ZUS5 278 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 VMO1Q7Z5L0 202 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 AMIGO2Q86SJ2 522 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 LDLRAD3Q86YD5 345 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 POC1AQ8NBT0 407 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 OR5D13Q8NGL4 314 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 ANGPTL6Q8NI99 470 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 AQP3Q92482 292 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 DYRK2Q92630 601 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 C10orf35Q96D05 121 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 C1orf147Q96MC9 270 aaPredicted RBP7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 GAFA1Q96PS6 74 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 SLITRK2Q9H156 845 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 RASSF4Q9H2L5 321 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 METTL8Q9H825 291 aaKnown RBP7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 BEX1Q9HBH7 125 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 SNTG1Q9NSN8 517 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 OAZ3Q9UMX2 235 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 COPS3Q9UNS2 423 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 PCDHGB1Q9Y5G3 927 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 MMP24Q9Y5R2 645 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 V9GYS6 101 aa7.5□□□□□ -1.21
SNORD88A-201ENST00000408314 TENM1Q9UKZ4 2725 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 ANKRD61A6NGH8 418 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 METTL15A6NJ78 407 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 SYT7O43581 403 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 SPRY1O43609 319 aaPredicted RBP7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 NOS1APO75052 506 aaPredicted RBP7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 NXPH2O95156 264 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 NDUFA7O95182 113 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 MELTFP08582 738 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 UBCP0CG48 685 aaKnown RBP7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 CCL1P22362 96 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 HAAOP46952 286 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 RAG2P55895 527 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 GMFBP60983 142 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 MFGE8Q08431 387 aaPredicted RBP7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 ACSM1Q08AH1 577 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 RUSC1-AS1Q66K80 236 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 FIP1L1Q6UN15 594 aaKnown RBP7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 GDPGP1Q6ZNW5 385 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 C17orf107Q6ZR85 190 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 KCTD20Q7Z5Y7 419 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 ZNF561Q8N587 486 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 DTX3Q8N9I9 347 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 TMEM185AQ8NFB2 350 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 OR10H4Q8NGA5 316 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 OR5T2Q8NGG2 359 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 OR5R1Q8NH85 324 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 PP6455Q8WZ26 134 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 SDSLQ96GA7 329 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 APOL4Q9BPW4 351 aa7.49□□□□□ -1.21
SNORD88A-201ENST00000408314 TTTY10Q9BZA0 68 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms