RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CTSLP07711 333 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 CD37P11049 281 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 HMGA1P17096 107 aaKnown RBP10.84□□□□□ -0.67
SMCR8-201ENST00000406438 MDH2P40926 338 aaKnown RBP10.84□□□□□ -0.67
SMCR8-201ENST00000406438 MAFAQ8NHW3 353 aaPredicted RBP10.84□□□□□ -0.67
SMCR8-201ENST00000406438 HGDQ93099 445 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 SLC25A19Q9HC21 320 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 EVX1P49640 407 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 LYRM7Q5U5X0 104 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 GALNT16Q8N428 558 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
SMCR8-201ENST00000406438 KRASP01116 189 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 ATF1P18846 271 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 GNG10P50151 68 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 CDK5R1Q15078 307 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 OR1C1Q15619 314 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 TMEM240Q5SV17 173 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 OR1L4Q8NGR5 311 aa10.83□□□□□ -0.67
SMCR8-201ENST00000406438 SDK2Q58EX2 2172 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 ADAM11O75078 769 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 PTBP3O95758 552 aaKnown RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 CD3DP04234 171 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 ZNF83P51522 516 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 IQCJQ1A5X6 159 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 RTN4IP1Q8WWV3 396 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 BOLA1Q9Y3E2 137 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 A0A1W2PPC4 97 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 PRSS44E7EML9 344 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 CLDN20P56880 219 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 ISL1P61371 349 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 FDX2Q6P4F2 183 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM108Q6UXF1 575 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 SFTPA2Q8IWL1 248 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 SFTPA1Q8IWL2 248 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 ZNF561Q8N587 486 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 RNF167Q9H6Y7 350 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 RCL1Q9Y2P8 373 aaKnown RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 PLA1AQ53H76 456 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 NOL4LQ96MY1 436 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 NPTNQ9Y639 398 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 TMPRSS11DO60235 418 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 HSBP1O75506 76 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 LY86O95711 162 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 GALR1P47211 349 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 CST9Q5W186 159 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 TCTN3Q6NUS6 607 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 FAAP20Q6NZ36 180 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 ZNF574Q6ZN55 896 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM229BQ8NBD8 167 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 OR4C3Q8NH37 302 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 GPR119Q8TDV5 335 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 SPRY1O43609 319 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 BSGP35613 385 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM267Q0VDI3 215 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 OR2T2Q6IF00 324 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 ACSM6Q6P461 480 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 PPIL1Q9Y3C6 166 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 MARF1Q9Y4F3 1742 aaKnown RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 FUT7Q11130 342 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 CXorf67Q86X51 503 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 OR11G2Q8NGC1 345 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 LINC00615Q96LM1 132 aaPredicted RBP10.83□□□□□ -0.68
SMCR8-201ENST00000406438 DOK1Q99704 481 aa10.83□□□□□ -0.68
SMCR8-201ENST00000406438 TRAV17A0A0B4J275 112 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 CBY3A6NI87 242 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 UPK1AO00322 258 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 EPXP11678 715 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 OR5R1Q8NH85 324 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 CCL4L1Q8NHW4 92 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 SPSB1Q96BD6 273 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 IL36GQ9NZH8 169 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 ONECUT2O95948 504 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 PGA3P0DJD8 388 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 GPNMBQ14956 572 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 CEACAM16Q2WEN9 425 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 MOGAT2Q3SYC2 334 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM211Q6ICI0 200 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 NT5CQ8TCD5 201 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 PDFQ9HBH1 243 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 A0A087WUJ7 227 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 SLC25A5P05141 298 aaKnown RBP10.82□□□□□ -0.68
SMCR8-201ENST00000406438 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
SMCR8-201ENST00000406438 NHLH1Q02575 133 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 NHLH2Q02577 135 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 SPEM1Q8N4L4 309 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 COMMD1Q8N668 190 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 OR13G1Q8NGZ3 307 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 FZR1Q9UM11 496 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 CYR61O00622 381 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 BMP5P22003 454 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 ACP1P24666 158 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 LGALS7P47929 136 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 SLC6A12P48065 614 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 GFERP55789 205 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 POMT2Q9UKY4 750 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 LRP12Q9Y561 859 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 PMP22Q01453 160 aa10.82□□□□□ -0.68
SMCR8-201ENST00000406438 TOMM34Q15785 309 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms