RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PRRX2Q99811 253 aa14.37□□□□□ -0.11
COL4A3BP-204ENST00000405807 NUDT9Q9BW91 350 aa14.37□□□□□ -0.11
COL4A3BP-204ENST00000405807 LPAR3Q9UBY5 353 aa14.37□□□□□ -0.11
COL4A3BP-204ENST00000405807 B9D1Q9UPM9 204 aa14.37□□□□□ -0.11
COL4A3BP-204ENST00000405807 SLC7A11Q9UPY5 501 aa14.37□□□□□ -0.11
COL4A3BP-204ENST00000405807 HDGFL3Q9Y3E1 203 aa14.37□□□□□ -0.11
COL4A3BP-204ENST00000405807 STK17BO94768 372 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 ST6GAL1P15907 406 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 ALDH3B1P43353 468 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 RAB7AP51149 207 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 RPS23P62266 143 aaKnown RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 RPL19P84098 196 aaKnown RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 EIF5AL1Q6IS14 154 aaKnown RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 AQP3Q92482 292 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 DCUN1D4Q92564 292 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 FAM71F1Q96KD3 344 aaPredicted RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 MRPS33Q9Y291 106 aaKnown RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 CSAG2Q9Y5P2 127 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 TGFBR3LH3BV60 316 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 DUS4LO95620 317 aaKnown RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 GIMD1P0DJR0 217 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 CYCSP99999 105 aaKnown RBP14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 NFATC4Q14934 902 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 RHEBQ15382 184 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 CD226Q15762 336 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 PRSS57Q6UWY2 283 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 CATSPERDQ86XM0 798 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 RAB33BQ9H082 229 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 HRASLS2Q9NWW9 162 aa14.36□□□□□ -0.11
COL4A3BP-204ENST00000405807 C13orf42A0A1B0GVH6 325 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 BLACEA4D250 179 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 FBXO24O75426 580 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 TRGC2P03986 189 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 SERPINA2P20848 420 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 CD1CP29017 333 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 GUK1Q16774 197 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 FNDC7Q5VTL7 733 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 CBLN3Q6UW01 205 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 NUFIP2Q7Z417 695 aaKnown RBP14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 TRAPPC6BQ86SZ2 158 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 ZNF563Q8TA94 476 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 PLEKHA2Q9HB19 425 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 PLSCR2Q9NRY7 297 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 TRBV6-7A0A0A0MS04 114 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 DHRS7CA6NNS2 312 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 AKR1C4P17516 323 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 MFGE8Q08431 387 aaPredicted RBP14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 SPOCK1Q08629 439 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 OTPQ5XKR4 325 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 SHDQ96IW2 340 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 NMES1Q9C002 83 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 RAB22AQ9UL26 194 aa14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 RBM7Q9Y580 266 aaKnown RBP14.35□□□□□ -0.11
COL4A3BP-204ENST00000405807 COL4A2P08572 1712 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 LOC105371242A0A075B767 164 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 SCDO00767 359 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 GCGP01275 180 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 FCGR3AP08637 254 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 CHRNB4P30926 498 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 ZNF260Q3ZCT1 412 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 C1orf100Q5SVJ3 147 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 COL5A1-AS1Q5SY13 56 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 RTL6Q6ICC9 239 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 MED25Q71SY5 747 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 NKD1Q969G9 470 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 MRGPRFQ96AM1 343 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 FOXN4Q96NZ1 517 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 HHLA2Q9UM44 414 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 CACNA1CQ13936 2221 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 TRGC1P0CF51 173 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 CX3CR1P49238 355 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 FUT7Q11130 342 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 TRIM61Q5EBN2 209 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 ZNF468Q5VIY5 522 aaPredicted RBP14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 DRAM2Q6UX65 266 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 SELENOHQ8IZQ5 122 aaKnown RBP14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 PAQR4Q8N4S7 273 aaPredicted RBP14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 FRMD1Q8N878 549 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 OR51A2Q8NGJ7 313 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 OR2J1Q9GZK6 312 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 PRTFDC1Q9NRG1 225 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 OBP2AQ9NY56 170 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 NUP210LQ5VU65 1888 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 A0A0C4DFX4 3053 aa14.34□□□□□ -0.11
COL4A3BP-204ENST00000405807 A0A0B4J2A0 478 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 PRSS37A4D1T9 235 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 C11orf98E9PRG8 122 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 SLC25A17O43808 307 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 SLC16A7O60669 478 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 TUBG1P23258 451 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 IGLV3-21P80748 117 aaPredicted RBP14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 ARL6IP1Q15041 203 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 WDFY1Q8IWB7 410 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 ELSPBP1Q96BH3 223 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 C8orf44Q96CB5 159 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 S1PR5Q9H228 398 aa14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.11
COL4A3BP-204ENST00000405807 TUBG2Q9NRH3 451 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms