RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 LINC01555Q8NAE3 123 aa11.96□□□□□ -0.49
SNED1-205ENST00000405547 RAB40CQ96S21 281 aa11.96□□□□□ -0.49
SNED1-205ENST00000405547 ZDHHC11Q9H8X9 412 aa11.96□□□□□ -0.49
SNED1-205ENST00000405547 ABCD4O14678 606 aa11.96□□□□□ -0.49
SNED1-205ENST00000405547 LY86O95711 162 aa11.96□□□□□ -0.49
SNED1-205ENST00000405547 RPS23P62266 143 aaKnown RBP11.96□□□□□ -0.49
SNED1-205ENST00000405547 UBE3DQ7Z6J8 389 aa11.96□□□□□ -0.49
SNED1-205ENST00000405547 CSN1S1P47710 185 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 RPL7L1Q6DKI1 246 aaKnown RBP11.96□□□□□ -0.5
SNED1-205ENST00000405547 HLA-CQ95604 372 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 SPACA9Q96E40 222 aaPredicted RBP11.96□□□□□ -0.5
SNED1-205ENST00000405547 ABCA7Q8IZY2 2146 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 XIRP1Q702N8 1843 aaKnown RBP11.96□□□□□ -0.5
SNED1-205ENST00000405547 AQP7O14520 342 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 CNIH1O95406 144 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 SLC25A4P12235 298 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 DSCR4P56555 118 aaPredicted RBP11.96□□□□□ -0.5
SNED1-205ENST00000405547 ZNF141Q15928 474 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 PWWP2BQ6NUJ5 590 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 CMBLQ96DG6 245 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 A0A1W2PPC4 97 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 GLRA1P23415 457 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 DRAM2Q6UX65 266 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 H1FXQ92522 213 aaKnown RBP11.96□□□□□ -0.5
SNED1-205ENST00000405547 ADGRG7Q96K78 797 aa11.96□□□□□ -0.5
SNED1-205ENST00000405547 PTHLHP12272 177 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 TPPP2P59282 170 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 IL13RA2Q14627 380 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 LGALSLQ3ZCW2 172 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 CPEB3Q8NE35 698 aaKnown RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 BVESQ8NE79 360 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 OR1F12Q8NHA8 337 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 CDKN2AP42771 156 aaKnown RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 OTPQ5XKR4 325 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 DGAT2L6Q6ZPD8 337 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 CLDN23Q96B33 292 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 ZNF275Q9NSD4 429 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 BPIFB3P59826 476 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 AMER3Q8N944 861 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 APOBEC3DQ96AK3 386 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 MIXL1Q9H2W2 232 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 SIRPB1O00241 398 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 PRKNO60260 465 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 GFERP55789 205 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 RAB35Q15286 201 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 JMJD6Q6NYC1 403 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 Q8IYB0 196 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 UBAC2Q8NBM4 344 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 GINS3Q9BRX5 216 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 TWSG1Q9GZX9 223 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 UBE2L5PA0A1B0GUS4 154 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 CDAP32320 146 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 ADPRHL1Q8NDY3 354 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 LINC01387J3KSC0 135 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 SEMG1P04279 462 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 DMWDQ09019 674 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 MRPL22Q9NWU5 206 aaKnown RBP11.95□□□□□ -0.5
SNED1-205ENST00000405547 RASL12Q9NYN1 266 aa11.95□□□□□ -0.5
SNED1-205ENST00000405547 PAX6P26367 422 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 SMIM21Q3B7S5 101 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 TMEM240Q5SV17 173 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 MRPS24Q96EL2 167 aaKnown RBP11.94□□□□□ -0.5
SNED1-205ENST00000405547 SEC11CQ9BY50 192 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 OPN4Q9UHM6 478 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 SCN10AQ9Y5Y9 1956 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 NDUFB7P17568 137 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 MEOX2P50222 304 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 C19orf57Q0VDD7 668 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 FOXF1Q12946 379 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 C6orf15Q6UXA7 325 aaPredicted RBP11.94□□□□□ -0.5
SNED1-205ENST00000405547 FGF14Q92915 247 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 FANCMQ8IYD8 2048 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 ALG1L2C9J202 215 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 CLDN34H7C241 214 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 INHBBP09529 407 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 GABRA1P14867 456 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 ZNF547Q8IVP9 402 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 BOD1Q96IK1 185 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 DOPEY2Q9Y3R5 2298 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 PMS2P1A4D2B8 440 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 ERVFC1-1P60608 527 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 GPR137Q96N19 417 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
SNED1-205ENST00000405547 XKRY2A2RUG3 117 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 PLA2G10O15496 165 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 HOXC4P09017 264 aaPredicted RBP11.94□□□□□ -0.5
SNED1-205ENST00000405547 MYOGP15173 224 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 B4GALT1P15291 398 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 SELENOPP49908 381 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 SP6Q3SY56 376 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 OR10X1Q8NGY0 326 aa11.94□□□□□ -0.5
SNED1-205ENST00000405547 IFI44Q8TCB0 444 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms