RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KCNK15Q9H427 330 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 SPEF1Q9Y4P9 236 aa18.04■□□□□ 0.48
TPM1-208ENST00000404484 ZNF83P51522 516 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 NAAAQ02083 359 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 PLA2G7Q13093 441 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 CDH24Q86UP0 819 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 SLC25A40Q8TBP6 338 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 SMIM4Q8WVI0 70 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 THAP7Q9BT49 309 aaPredicted RBP18.03■□□□□ 0.48
TPM1-208ENST00000404484 OR2J1Q9GZK6 312 aa18.03■□□□□ 0.48
TPM1-208ENST00000404484 MRPL15Q9P015 296 aaKnown RBP18.03■□□□□ 0.48
TPM1-208ENST00000404484 NOP16Q9Y3C1 178 aaKnown RBP18.03■□□□□ 0.48
TPM1-208ENST00000404484 C19orf84I3L1E1 186 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 PPP3CBP16298 524 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 PTH2RP49190 550 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 ASCL1P50553 236 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 CEACAM21Q3KPI0 293 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 SPATA46Q5T0L3 261 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 ZNF787Q6DD87 383 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 CMBLQ96DG6 245 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 C1orf147Q96MC9 270 aaPredicted RBP18.02■□□□□ 0.48
TPM1-208ENST00000404484 NUDT16L1Q9BRJ7 211 aaKnown RBP18.02■□□□□ 0.48
TPM1-208ENST00000404484 URM1Q9BTM9 101 aaKnown RBP18.02■□□□□ 0.48
TPM1-208ENST00000404484 GPR160Q9UJ42 338 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 ING4Q9UNL4 249 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 CACNA1DQ01668 2161 aa18.02■□□□□ 0.48
TPM1-208ENST00000404484 GABARAPH6UMI1 98 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 M0R1B8 84 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 CRYAAP02489 173 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 CHRM2P08172 466 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 TMEM225BP0DP42 221 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 CCKARP32238 428 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 ZP1P60852 638 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 UNC119Q13432 240 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 ASAH1Q13510 395 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 GPR176Q14439 515 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 OXA1LQ15070 435 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 OR2T2Q6IF00 324 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 OR10K2Q6IF99 312 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 CRIP3Q6Q6R5 217 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 CENPSQ8N2Z9 138 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 OR5A2Q8NGI9 324 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 OR5D18Q8NGL1 313 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 TMEM59Q9BXS4 323 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 PCDHB16Q9NRJ7 776 aa18.01■□□□□ 0.47
TPM1-208ENST00000404484 NKX2-6A6NCS4 301 aa18■□□□□ 0.47
TPM1-208ENST00000404484 OR5B21A6NL26 309 aa18■□□□□ 0.47
TPM1-208ENST00000404484 FAM90A27PA6NNH2 459 aa18■□□□□ 0.47
TPM1-208ENST00000404484 ZNF780AO75290 641 aaPredicted RBP18■□□□□ 0.47
TPM1-208ENST00000404484 ZNF718Q3SXZ3 478 aa18■□□□□ 0.47
TPM1-208ENST00000404484 DMRTC1Q5HYR2 192 aa18■□□□□ 0.47
TPM1-208ENST00000404484 DCDC5Q6ZRR9 648 aa18■□□□□ 0.47
TPM1-208ENST00000404484 RNF144BQ7Z419 303 aa18■□□□□ 0.47
TPM1-208ENST00000404484 FCAMRQ8WWV6 532 aa18■□□□□ 0.47
TPM1-208ENST00000404484 TRIM63Q969Q1 353 aa18■□□□□ 0.47
TPM1-208ENST00000404484 ITPKCQ96DU7 683 aa18■□□□□ 0.47
TPM1-208ENST00000404484 MARS2Q96GW9 593 aaKnown RBP18■□□□□ 0.47
TPM1-208ENST00000404484 METTL9Q9H1A3 318 aa18■□□□□ 0.47
TPM1-208ENST00000404484 TBC1D24Q9ULP9 559 aa18■□□□□ 0.47
TPM1-208ENST00000404484 NAV2Q8IVL1 2488 aa18■□□□□ 0.47
TPM1-208ENST00000404484 TRAV18A0A075B6X5 111 aa18■□□□□ 0.47
TPM1-208ENST00000404484 IQCF6A8MYZ5 107 aa18■□□□□ 0.47
TPM1-208ENST00000404484 CDC14BO60729 498 aa18■□□□□ 0.47
TPM1-208ENST00000404484 CRTAPO75718 401 aaPredicted RBP18■□□□□ 0.47
TPM1-208ENST00000404484 KDM4BO94953 1096 aa18■□□□□ 0.47
TPM1-208ENST00000404484 MPIG6BO95866 241 aa18■□□□□ 0.47
TPM1-208ENST00000404484 SLC22A6Q4U2R8 563 aa18■□□□□ 0.47
TPM1-208ENST00000404484 ZNF57Q68EA5 555 aaPredicted RBP18■□□□□ 0.47
TPM1-208ENST00000404484 ZSCAN4Q8NAM6 433 aaPredicted RBP18■□□□□ 0.47
TPM1-208ENST00000404484 BHLHE23Q8NDY6 225 aa18■□□□□ 0.47
TPM1-208ENST00000404484 PXT1Q8NFP0 134 aa18■□□□□ 0.47
TPM1-208ENST00000404484 KLF14Q8TD94 323 aaPredicted RBP18■□□□□ 0.47
TPM1-208ENST00000404484 YIPF5Q969M3 257 aa18■□□□□ 0.47
TPM1-208ENST00000404484 LRRC46Q96FV0 321 aa18■□□□□ 0.47
TPM1-208ENST00000404484 ELL3Q9HB65 397 aaPredicted RBP18■□□□□ 0.47
TPM1-208ENST00000404484 KCNJ16Q9NPI9 418 aa18■□□□□ 0.47
TPM1-208ENST00000404484 MYEF2Q9P2K5 600 aaKnown RBP18■□□□□ 0.47
TPM1-208ENST00000404484 IGKV1-27A0A075B6S5 117 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 PQLC2LA1A4F0 135 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 GCH1P30793 250 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 CALCRP30988 508 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 DGCR2P98153 550 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 TFF3Q07654 80 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 MZT2BQ6NZ67 158 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 ASCL4Q6XD76 172 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 SLC22A4Q9H015 551 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 NPAP1Q9NZP6 1156 aa17.99■□□□□ 0.47
TPM1-208ENST00000404484 ITPR2Q14571 2701 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 RPS23P62266 143 aaKnown RBP17.98■□□□□ 0.47
TPM1-208ENST00000404484 PDZK1IP1Q13113 114 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 RSU1Q15404 277 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 FBXL19-AS1Q494R0 122 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 MBNL2Q5VZF2 373 aaKnown RBP17.98■□□□□ 0.47
TPM1-208ENST00000404484 ALKBH2Q6NS38 261 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 Q6ZNX1 250 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 BIVMQ86UB2 503 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 HPSE2Q8WWQ2 592 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 OR5P3Q8WZ94 311 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 MICU1Q9BPX6 476 aa17.98■□□□□ 0.47
TPM1-208ENST00000404484 OCEL1Q9H607 264 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms