RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 KLK2P20151 261 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 IAH1Q2TAA2 248 aaPredicted RBP9.4□□□□□ -0.9
CLIP4-204ENST00000404424 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.9
CLIP4-204ENST00000404424 SPEM1Q8N4L4 309 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 FNDC9Q8TBE3 224 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 MAFIPQ8WZ33 124 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 SPTSSAQ969W0 71 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 ZNF799Q96GE5 643 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 Q96M66 194 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 PIGQQ9BRB3 760 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 ZNF2Q9BSG1 426 aaPredicted RBP9.4□□□□□ -0.9
CLIP4-204ENST00000404424 HRH4Q9H3N8 390 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 ZFP57Q9NU63 452 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 RCC2Q9P258 522 aaKnown RBP9.4□□□□□ -0.9
CLIP4-204ENST00000404424 TUBD1Q9UJT1 453 aa9.4□□□□□ -0.9
CLIP4-204ENST00000404424 A0A1W2PQM1 296 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 C5orf63A6NC05 138 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 OR5H15A6NDH6 313 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 CRYM-AS1A6NIL9 109 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 NPIPA2E9PIF3 369 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 NPIPA3F8WFD2 350 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 K7EPK0 472 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF708P17019 499 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 RPL12P30050 165 aaKnown RBP9.4□□□□□ -0.91
CLIP4-204ENST00000404424 RSPO1Q2MKA7 263 aaPredicted RBP9.4□□□□□ -0.91
CLIP4-204ENST00000404424 PRAMEF20Q5VT98 475 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 RPL7L1Q6DKI1 246 aaKnown RBP9.4□□□□□ -0.91
CLIP4-204ENST00000404424 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 SPSB1Q96BD6 273 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 SAV1Q9H4B6 383 aaPredicted RBP9.4□□□□□ -0.91
CLIP4-204ENST00000404424 ELL3Q9HB65 397 aaPredicted RBP9.4□□□□□ -0.91
CLIP4-204ENST00000404424 PARP11Q9NR21 331 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 HSF4Q9ULV5 492 aa9.4□□□□□ -0.91
CLIP4-204ENST00000404424 LRP3O75074 770 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 DEDDO75618 318 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 RFC3P40938 356 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 SUCLG1P53597 346 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 STARD6P59095 220 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 CCL7P80098 99 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PHYHD1Q5SRE7 291 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 TMEM268Q5VZI3 342 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 LCN10Q6JVE6 187 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 RPUSD3Q6P087 351 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 OPN5Q6U736 354 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 GALNTL5Q7Z4T8 443 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 C6orf201Q7Z4U5 140 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 CBLN2Q8IUK8 224 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 TMEM123Q8N131 208 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 CYYR1Q96J86 154 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 ACKR4Q9NPB9 350 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PLEK2Q9NYT0 353 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 ANXA10Q9UJ72 324 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 NXT1Q9UKK6 140 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 MCTS1Q9ULC4 181 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 LOC102723996A0A087X1L8 192 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 RNASEK-C17orf49H0YIS7 233 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 MED6O75586 246 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 CD5P06127 495 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 MUC1P15941 1255 aaPredicted RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 DTYMKP23919 212 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 NPBWR1P48145 328 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 HOXA1P49639 335 aaPredicted RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 F2RL1P55085 397 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 DSCR4P56555 118 aaPredicted RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 FAM3AP98173 230 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PCOLCEQ15113 449 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 DMRTC1Q5HYR2 192 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 BTNL8Q6UX41 500 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 SKA3Q8IX90 412 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 LRRC18Q8N456 261 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 WNT2BQ93097 391 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PIGTQ969N2 578 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF385AQ96PM9 386 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PRRX2Q99811 253 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 ADAT1Q9BUB4 502 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 RBM24Q9BX46 236 aaKnown RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 ANGPTL4Q9BY76 406 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 WDR54Q9H977 334 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PLEKHA2Q9HB19 425 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 FOXD3Q9UJU5 478 aaPredicted RBP9.39□□□□□ -0.91
CLIP4-204ENST00000404424 PADI1Q9ULC6 663 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 KCNIP3Q9Y2W7 256 aa9.39□□□□□ -0.91
CLIP4-204ENST00000404424 CD63P08962 238 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 GABRR1P24046 479 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 EPHA8P29322 1005 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-204ENST00000404424 RAB13P51153 203 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 FAM27BQ5VT28 67 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 MAML2Q8IZL2 1156 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-204ENST00000404424 OR9K2Q8NGE7 335 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-204ENST00000404424 CCDC74BQ96LY2 380 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 NCOA6Q14686 2063 aaPredicted RBP9.38□□□□□ -0.91
CLIP4-204ENST00000404424 IGKV1D-8A0A087WSZ0 117 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 FCGR3AP08637 254 aa9.38□□□□□ -0.91
CLIP4-204ENST00000404424 OR5H8P0DN80 308 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms