RNA–Protein interactions for RNA: ENST00000403076.5

SDC1-203, Transcript of syndecan 1, humanhuman

TSL 1 (best) BASIC

Gene SDC1, Length 1,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-203ENST00000403076 SLC25A46Q96AG3 418 aa15.34■□□□□ 0.05
SDC1-203ENST00000403076 EGLN1Q9GZT9 426 aa15.34■□□□□ 0.05
SDC1-203ENST00000403076 IL19Q9UHD0 177 aa15.34■□□□□ 0.05
SDC1-203ENST00000403076 LOC100289279A0A1B0GTE1 492 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 LRP5LA4QPB2 252 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 A6NLC8 198 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 ADH4P08319 380 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 TMEM225BP0DP42 221 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 SOX6P35712 828 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 FAM209AQ5JX71 171 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 IDNKQ5T6J7 187 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 SFXN4Q6P4A7 337 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 HAGHLQ6PII5 290 aaPredicted RBP15.33■□□□□ 0.05
SDC1-203ENST00000403076 NR2C2APQ86WQ0 139 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 CROCCP3Q8IVE0 287 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 TNFAIP8L1Q8WVP5 186 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 MEGF10Q96KG7 1140 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 S100A13Q99584 98 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 UQCC2Q9BRT2 126 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 CACNG6Q9BXT2 260 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 RAB1BQ9H0U4 201 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 CNTD2Q9H8S5 307 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 UFSP2Q9NUQ7 469 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 DAPK2Q9UIK4 370 aa15.33■□□□□ 0.05
SDC1-203ENST00000403076 BAHCC1Q9P281 2608 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 A0A0G2JK05 382 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 IFITM5A6NNB3 132 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 SLC17A2O00624 439 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 CYB5AP00167 134 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 SLC2A2P11168 524 aaPredicted RBP15.33■□□□□ 0.04
SDC1-203ENST00000403076 ZNF182P17025 639 aaPredicted RBP15.33■□□□□ 0.04
SDC1-203ENST00000403076 HTR2CP28335 458 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 ZNF154Q13106 437 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 RAB11BQ15907 218 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 C1orf100Q5SVJ3 147 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 ZNF787Q6DD87 383 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 WDR86Q86TI4 376 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 CELF2-AS1Q8N7Q2 184 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 OR6M1Q8NGM8 313 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 DYNC2LI1Q8TCX1 351 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 OR51I2Q9H344 312 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 ELL3Q9HB65 397 aaPredicted RBP15.33■□□□□ 0.04
SDC1-203ENST00000403076 ING4Q9UNL4 249 aa15.33■□□□□ 0.04
SDC1-203ENST00000403076 MRPS28Q9Y2Q9 187 aaKnown RBP15.33■□□□□ 0.04
SDC1-203ENST00000403076 UTP20O75691 2785 aaKnown RBP15.32■□□□□ 0.04
SDC1-203ENST00000403076 AIPO00170 330 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 SPRY1O43609 319 aaPredicted RBP15.32■□□□□ 0.04
SDC1-203ENST00000403076 CD55P08174 381 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 TNFRSF1AP19438 455 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 PTGFRP43088 359 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 OR3A4PP47883 348 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 DGUOKQ16854 277 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 FAM76BQ5HYJ3 339 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 AWAT2Q6E213 333 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 CALHM1Q8IU99 346 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 SCCPDHQ8NBX0 429 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 ZNF671Q8TAW3 534 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 SAP30LQ9HAJ7 183 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 STEAP1Q9UHE8 339 aa15.32■□□□□ 0.04
SDC1-203ENST00000403076 hCG_1807616A0A1W2PRN6 198 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 J3QT63 122 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 CDIPTO14735 213 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 RANBP1P43487 201 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 CLDN12P56749 244 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 PDZK1IP1Q13113 114 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 RIN1Q13671 783 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 P2RY14Q15391 338 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 TESK1Q15569 626 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 MPPED2Q15777 294 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 SPRNQ5BIV9 151 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 SLC25A26Q70HW3 274 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 OR4D6Q8NGJ1 314 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 OR51F2Q8NH61 342 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 CCL19Q99731 98 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 FN3KRPQ9HA64 309 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 C1orf123Q9NWV4 160 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 ARFGEF3Q5TH69 2177 aa15.31■□□□□ 0.04
SDC1-203ENST00000403076 ANGPTL7O43827 346 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 CD37P11049 281 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 CDKN1AP38936 164 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 CNPY1Q3B7I2 92 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 CRIP3Q6Q6R5 217 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 GLIPR1L1Q6UWM5 242 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 MOGAT3Q86VF5 341 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 LYPD6Q86Y78 171 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 MKXQ8IYA7 352 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 AQP3Q92482 292 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 BARHL1Q9BZE3 327 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 PKIBQ9C010 78 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 CCDC59Q9P031 241 aaKnown RBP15.3■□□□□ 0.04
SDC1-203ENST00000403076 DSCAMO60469 2012 aa15.3■□□□□ 0.04
SDC1-203ENST00000403076 SYNGR1O43759 233 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 ZP1P60852 638 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 RSU1Q15404 277 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 ZNF826PQ6ZT77 177 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 OR51D1Q8NGF3 324 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 OR11L1Q8NGX0 322 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 ERGIC1Q969X5 290 aa15.29■□□□□ 0.04
SDC1-203ENST00000403076 SLAMF9Q96A28 289 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms