RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 OR2G2Q8NGZ5 317 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 ARHGAP5-AS1Q96IT6 56 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 HAX1O00165 279 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 PSMB6P28072 239 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 FNDC7Q5VTL7 733 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 OR4C16Q8NGL9 310 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 LINC00052Q96N35 136 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 ZMIZ1Q9ULJ6 1067 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 FUCA1P04066 466 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 GPNMBQ14956 572 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 TEX101Q9BY14 249 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 XKRY2A2RUG3 117 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 PABPC1L2AQ5JQF8 200 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 TRIP11Q15643 1979 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 ITGB4P16144 1822 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 TMEM30CPA0ZSE6 113 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 MAGEA5P43359 124 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 FUT6P51993 359 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 VAMP3Q15836 100 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 TRAV17A0A0B4J275 112 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 CBY3A6NI87 242 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 SPP1P10451 314 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 ZNF32P17041 273 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 ARRB2P32121 409 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 MCHR2Q969V1 340 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 WDR89Q96FK6 387 aaPredicted RBP12.3□□□□□ -0.44
VAPA-202ENST00000400000 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 LAMP3Q9UQV4 416 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 PPP1CBP62140 327 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 SUMO1P63165 101 aaKnown RBP12.3□□□□□ -0.44
VAPA-202ENST00000400000 ACER2Q5QJU3 275 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 PPP1R1CQ8WVI7 109 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 UCK1Q9HA47 277 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 MYOZ1Q9NP98 299 aaPredicted RBP12.3□□□□□ -0.44
VAPA-202ENST00000400000 SLC6A13Q9NSD5 602 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 LIPGQ9Y5X9 500 aa12.3□□□□□ -0.44
VAPA-202ENST00000400000 A0A0A6YYD5 115 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 ZNF596Q8TC21 504 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 MZB1Q8WU39 189 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 BCL2L2Q92843 193 aaPredicted RBP12.29□□□□□ -0.44
VAPA-202ENST00000400000 SMIM19Q96E16 107 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 VPS25Q9BRG1 176 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 MOB1AQ9H8S9 216 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 IGHV1OR15-9A0A0B4J2B8 117 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 CDK2AP1O14519 115 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 OXA1LQ15070 435 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 GPX8Q8TED1 209 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 CABLES2Q9BTV7 478 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 VMA21Q3ZAQ7 101 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 TUSC5Q8IXB3 177 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 ZDHHC11Q9H8X9 412 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 LSM2Q9Y333 95 aaKnown RBP12.29□□□□□ -0.44
VAPA-202ENST00000400000 TRAV39A0A0B4J263 110 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 C9orf172C9J069 976 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 ICMTO60725 284 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 CTSVO60911 334 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 PTBP3O95758 552 aaKnown RBP12.29□□□□□ -0.44
VAPA-202ENST00000400000 ACTL6AO96019 429 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 COX5AP20674 150 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 LPAR6P43657 344 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 TFPI2P48307 235 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 ETFDHQ16134 617 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 TMPRSS5Q9H3S3 457 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
VAPA-202ENST00000400000 SBK3P0C264 359 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 CNN1P51911 297 aaKnown RBP12.29□□□□□ -0.44
VAPA-202ENST00000400000 ISL1P61371 349 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 TIAL1Q01085 375 aaKnown RBP eCLIP12.29□□□□□ -0.445e-7■■■■□ 21
VAPA-202ENST00000400000 Q6ZNB5 142 aa12.29□□□□□ -0.44
VAPA-202ENST00000400000 TCRBV5S1A1TA0A578 114 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 CSN3P07498 182 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 RPL7P18124 248 aaKnown RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 GABARAPL1Q9H0R8 117 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 MTCH2Q9Y6C9 303 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 LAMA4Q16363 1823 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 NEURL1O76050 574 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 GABRB1P18505 474 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 NPY1RP25929 384 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 CDK5R1Q15078 307 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 FA2HQ7L5A8 372 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 APOBEC3DQ96AK3 386 aaPredicted RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 MRPS18BQ9Y676 258 aaKnown RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 E5RGE8 158 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 TNFRSF1AP19438 455 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 HLXQ14774 488 aaPredicted RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 TOMM34Q15785 309 aaPredicted RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 CMPK2Q5EBM0 449 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 OR4A4PQ8NGN8 299 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 LILRB1Q8NHL6 650 aaPredicted RBP12.28□□□□□ -0.44
VAPA-202ENST00000400000 GABRG3Q99928 467 aa12.28□□□□□ -0.44
VAPA-202ENST00000400000 NSG2Q9Y328 171 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms