RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NPIPB13A6NJU9 1138 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 NPIPB4C9JG80 1138 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 TEX46H3BTG2 121 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 CDC14BO60729 498 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 TBPP20226 339 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 Q5BKY6 102 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 C6orf201Q7Z4U5 140 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 SLC30A7Q8NEW0 376 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 TERB2Q8NHR7 220 aa12.34□□□□□ -0.43
SCAF4-202ENST00000399804 CACNA1DQ01668 2161 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 LAMA2P24043 3122 aaKnown RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 HLA-DQB1P01920 261 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 LRRTM1Q86UE6 522 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 TMEM200CA6NKL6 621 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 POM121CA8CG34 1229 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 SOCS1O15524 211 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 IGHMP01871 453 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 PTGS2P35354 604 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 IAH1Q2TAA2 248 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 TFAP2EQ6VUC0 442 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF687Q8N1G0 1237 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 RGP1Q92546 391 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF71Q9NQZ8 489 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-202ENST00000399804 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 ST7LQ8TDW4 575 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 SMIM3Q9BZL3 60 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 POLDIP2Q9Y2S7 368 aa12.33□□□□□ -0.44
SCAF4-202ENST00000399804 GSK3AP49840 483 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 GK2Q14410 553 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-202ENST00000399804 PNLIPRP3Q17RR3 467 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 GLDNQ6ZMI3 551 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-202ENST00000399804 SLAMF9Q96A28 289 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 SLC25A38Q96DW6 304 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 ZFP57Q9NU63 452 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 TRBV5-7A0A0A0MS05 114 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 PRR32B1ATL7 298 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 J3QRE1 110 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 TSPAN4O14817 238 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 PHF1O43189 567 aaPredicted RBP12.32□□□□□ -0.44
SCAF4-202ENST00000399804 EFSO43281 561 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 KLK2P20151 261 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 CA6P23280 308 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 P2RX3P56373 397 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 PSG4Q00888 419 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 FADS6Q8N9I5 356 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 A0A087WV48 116 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 RAG2P55895 527 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 PRDX4Q13162 271 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF718Q3SXZ3 478 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 HIKESHIQ53FT3 197 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 FBXW12Q6X9E4 464 aa12.32□□□□□ -0.44
SCAF4-202ENST00000399804 KIR2DS1A0A191URI9 304 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 ERVH48-1M5A8F1 160 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 EFNA2O43921 213 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 CELA3AP09093 270 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 FCGR2CP31995 323 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 KIR2DS4P43632 304 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 RPS11P62280 158 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCAF4-202ENST00000399804 KIR2DS1Q14954 304 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 NR2C2APQ86WQ0 139 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF485Q8NCK3 441 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 OR1S1Q8NH92 325 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 SEH1LQ96EE3 360 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 DYNLRB1Q9NP97 96 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 LY6G6EA0A0G2JKS1 128 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 M0R1B8 84 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 SIRPB1O00241 398 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 FUT3P21217 361 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 S100A11P31949 105 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 KLF9Q13886 244 aaPredicted RBP12.31□□□□□ -0.44
SCAF4-202ENST00000399804 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 SKA3Q8IX90 412 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 U3KQA8 63 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 PCNX1Q96RV3 2341 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 ATF4P18848 351 aaPredicted RBP12.31□□□□□ -0.44
SCAF4-202ENST00000399804 GNG3P63215 75 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 G6PC2Q9NQR9 355 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 FAM206AQ9NX38 181 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
SCAF4-202ENST00000399804 IL5P05113 134 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 MPGP29372 298 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 ZMYND11Q15326 602 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF385CQ66K41 422 aaPredicted RBP12.3□□□□□ -0.44
SCAF4-202ENST00000399804 FDX2Q6P4F2 183 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 NGBQ9NPG2 151 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 MUC6Q6W4X9 2439 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 COMMD7Q86VX2 200 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 ARRDC1Q8N5I2 433 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms