RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 AADACP22760 399 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 ECI1P42126 302 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 KIR3DL2P43630 455 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 PNLIPRP3Q17RR3 467 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 MESTQ5EB52 335 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 SLC38A9Q8NBW4 561 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 VN1R17PQ8TDU5 208 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 SLAMF6Q96DU3 332 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 AMELYQ99218 206 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 ZNF586Q9NXT0 402 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 PPIL1Q9Y3C6 166 aa8.3□□□□□ -1.08
COL28A1-201ENST00000399429 SIPA1L1O43166 1804 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 DHRS7CA6NNS2 312 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 C9JQL5 133 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 ATP6V0CP27449 155 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 CCKARP32238 428 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 P2RY1P47900 373 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 SLC6A8P48029 635 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 GABRA4P48169 554 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 RND3P61587 244 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 C1orf61Q13536 156 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 WBP1Q96G27 269 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MRPL37Q9BZE1 423 aaKnown RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MMP25Q9NPA2 562 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 BTAF1O14981 1849 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 A0A1W2PR80 420 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 VSTM2BA6NLU5 285 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 KLF4O43474 513 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 GCGP01275 180 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 APODP05090 189 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 SLC35E2P0CK97 266 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 OR10J1P30954 320 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TPPP2P59282 170 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TAS2R30P59541 319 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MALLQ13021 153 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 EMC4Q5J8M3 183 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 COL5A1-AS1Q5SY13 56 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MORN1Q5T089 497 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 Q6ZN92 141 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 CDC20BQ86Y33 519 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 ZNF595Q8IYB9 648 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 ERGIC1Q969X5 290 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MARS2Q96GW9 593 aaKnown RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TSPAN32Q96QS1 320 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 RBM24Q9BX46 236 aaKnown RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 ANKRD10Q9NXR5 420 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 A0A1W2PPV4 95 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 J3QRE1 110 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 GAPDHP04406 335 aaKnown RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 VSIG8P0DPA2 414 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 P2RY2P41231 377 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 BIDP55957 195 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 RUNX1Q01196 453 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 PHF19Q5T6S3 580 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TP53RKQ96S44 253 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TPSD1Q9BZJ3 242 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 PBOV1Q9GZY1 135 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 ARV1Q9H2C2 271 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 PLEKHF2Q9H8W4 249 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MED29Q9NX70 200 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 PLEK2Q9NYT0 353 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TRBV5-5A0A0J9YX44 114 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 A8MXE2 369 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 UTS2O95399 124 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 CD5P06127 495 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 MYOGP15173 224 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 RPS21P63220 83 aaKnown RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 PMP22Q01453 160 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 PCK2Q16822 640 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 BSXQ3C1V8 233 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 BTNL8Q6UX41 500 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 HEPN1Q6WQI6 88 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 OR51H1Q8NH63 302 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 HLA-CQ95604 372 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 CCNL2Q96S94 520 aaPredicted RBP8.29□□□□□ -1.08
COL28A1-201ENST00000399429 DTX4Q9Y2E6 619 aa8.29□□□□□ -1.08
COL28A1-201ENST00000399429 TMED7-TICAM2A0A0A6YYA0 188 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 HSPB2A8KAH6 182 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 DDAH2O95865 285 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 LCATP04180 440 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 CD1AP06126 327 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 FCGR3AP08637 254 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 ZNF43P17038 809 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 APLNRP35414 380 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 OR3A4PP47883 348 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 HBG1P69891 147 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 HBG2P69892 147 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 ZNF90Q03938 601 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
COL28A1-201ENST00000399429 HSPB2Q16082 182 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 PRTGQ2VWP7 1150 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
COL28A1-201ENST00000399429 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL28A1-201ENST00000399429 OR2T10Q8NGZ9 312 aa8.28□□□□□ -1.08
COL28A1-201ENST00000399429 DAZLQ92904 295 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms