RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SCARB1Q8WTV0 552 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 TMED6Q8WW62 240 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 LNP1A1A4G5 178 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 IGHV3-13P01766 116 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 IGHV3-7P01780 117 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 WNT1P04628 370 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 MAGEA5P43359 124 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF117Q03924 483 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 C20orf196Q8IYI0 205 aa12.72□□□□□ -0.37
PCDHA11-201ENST00000398640 IFITM5A6NNB3 132 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 SULT1C4O75897 302 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 GALNSP34059 522 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 NPEPL1Q8NDH3 523 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 LRP12Q9Y561 859 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 OTOFQ9HC10 1997 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 ONECUT2O95948 504 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 FMODQ06828 376 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 LINC00299Q6ZSB3 139 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 FAM60AQ9NP50 221 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 NPTNQ9Y639 398 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 DBX1A6NMT0 343 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 OR2C1O95371 312 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 RPL12P30050 165 aaKnown RBP12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 GUCA2AQ02747 115 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 PELI1Q96FA3 418 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 BTF3L4Q96K17 158 aa12.71□□□□□ -0.37
PCDHA11-201ENST00000398640 M0R1X1 148 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 MRGPREQ86SM8 312 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 PTOV1Q86YD1 416 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 OR2G2Q8NGZ5 317 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 GPX8Q8TED1 209 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 BCL2L10Q9HD36 194 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC25A4P12235 298 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 ZBTB25P24278 435 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 YBX1P67809 324 aaKnown RBP12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 AQP6Q13520 282 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 LHX4Q969G2 390 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 TMEM208Q9BTX3 173 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 PRDM7Q9NQW5 492 aa12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.38
PCDHA11-201ENST00000398640 UBE2L5PA0A1B0GUS4 154 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF205O95201 554 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 SBK3P0C264 359 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 DEFA6Q01524 100 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF239Q16600 458 aaKnown RBP12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF787Q6DD87 383 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 ADAM5Q6NVV9 412 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 UMAD1C9J7I0 102 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 FUCA1P04066 466 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 HMGCLL1Q8TB92 370 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 NTN4Q9HB63 628 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 PCOLCE2Q9UKZ9 415 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 CLEC18AA5D8T8 446 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 TCAPO15273 167 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC25A35Q3KQZ1 300 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 UBE3DQ7Z6J8 389 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 CDH26Q8IXH8 852 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 CLEC18CQ8NCF0 446 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 RAB19A4D1S5 217 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 PPP5D1E7EU14 171 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 OR4E1P0C645 316 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 SMIM17P0DL12 118 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 FAM27D1Q5T7N8 215 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 LRRC29Q8WV35 223 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 EDARADDQ8WWZ3 215 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 DERL3Q96Q80 235 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF727A8MUV8 499 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 GPR31O00270 319 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 AQP8O94778 261 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 VMA21Q3ZAQ7 101 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 DCAF10Q5QP82 559 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 H3F3CQ6NXT2 135 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC25A19Q9HC21 320 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 FBXO34Q9NWN3 711 aa12.7□□□□□ -0.38
PCDHA11-201ENST00000398640 DCTDP32321 178 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 BMI1P35226 326 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF793Q6ZN11 406 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 LFNGQ8NES3 379 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 NRTNQ99748 197 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 TMEM30CPA0ZSE6 113 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 TIGITQ495A1 244 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 LYG1Q8N1E2 194 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 OR4S1Q8NGB4 309 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 RAB1CQ92928 201 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 EXTL1Q92935 676 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 POM121L2Q96KW2 1035 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 WDR54Q9H977 334 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 IGHV3-43A0A0B4J1X8 118 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 JTBO76095 146 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 PATE4P0C8F1 98 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 IGHV3-43DP0DP04 118 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 PSMB6P28072 239 aa12.69□□□□□ -0.38
PCDHA11-201ENST00000398640 CEACAM6P40199 344 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms