RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SERTAD4Q9NUC0 356 aa12.63□□□□□ -0.39
PCDHGA11-201ENST00000398587 SSX4O60224 188 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 PLA1AQ53H76 456 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 SLC38A6Q8IZM9 456 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 SLC25A45Q8N413 288 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 RNF133Q8WVZ7 376 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 B4E171 279 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 GPR31O00270 319 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 TSPAN7P41732 249 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 DHRS2Q13268 280 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR2T2Q6IF00 324 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 GCNT2Q8N0V5 402 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 COLQQ9Y215 455 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 TO15178 435 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 GMDSO60547 372 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 CDC14BO60729 498 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR3A4PP47883 348 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 HTD2P86397 168 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 H3F3CQ6NXT2 135 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 SLC26A10Q8NG04 563 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 DNASE2BQ8WZ79 361 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 ST8SIA2Q92186 375 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 LSM2Q9Y333 95 aaKnown RBP12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 CACNA1EQ15878 2313 aa12.62□□□□□ -0.39
PCDHGA11-201ENST00000398587 TSPAN2O60636 221 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 PDCD6O75340 191 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ASAH2BP0C7U1 165 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 PATE4P0C8F1 98 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 CHRNB4P30926 498 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 GGTLC2Q14390 218 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 CTHRC1Q96CG8 243 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 S1PR3Q99500 378 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 WFDC6Q9BQY6 131 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ARV1Q9H2C2 271 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 KPTNQ9Y664 436 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 H3BMH7 237 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 PRDX4Q13162 271 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 SPANXN5Q5MJ07 72 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 MRPS24Q96EL2 167 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 LIFP15018 202 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZBTB37Q5TC79 503 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF626Q68DY1 528 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 C11orf87Q6NUJ2 197 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 MUC20Q8N307 709 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 RELL2Q8NC24 303 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 BORCS7Q96B45 105 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 TIMD4Q96H15 378 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF629Q9UEG4 869 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZNF236Q9UL36 1845 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 BCL2L11O43521 198 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 KCNIP4Q6PIL6 250 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ASB5Q8WWX0 329 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 ST6GALNAC2Q9UJ37 374 aa12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 STRAPQ9Y3F4 350 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-201ENST00000398587 SSSCA1O60232 199 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 LGALS4P56470 323 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR2B11Q5JQS5 317 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 OR10AC1Q8NH08 325 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 GALMQ96C23 342 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 C10orf35Q96D05 121 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 PARP12Q9H0J9 701 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 RYDENQ9NUL5 291 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 NDRG3Q9UGV2 375 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 CD1AP06126 327 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 S100A7P31151 101 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 PSMB3P49720 205 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 GSK3AP49840 483 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 SELENOPP49908 381 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 MPPED2Q15777 294 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 MOB1BQ7L9L4 216 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 NUFIP2Q7Z417 695 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 FBXW5Q969U6 566 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 LIN37Q96GY3 246 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 CNOT1A5YKK6 2376 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 ZP4Q12836 540 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 CEBPEQ15744 281 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TEX261Q6UWH6 196 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TMEM182Q6ZP80 229 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 C6orf201Q7Z4U5 140 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 MRGPREQ86SM8 312 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 FAM58AQ8N1B3 248 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 HPSE2Q8WWQ2 592 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 GPX7Q96SL4 187 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 SMCO4Q9NRQ5 59 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 U3KQ87 197 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TRAV8-7A0A075B6U6 113 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 TXNDC12O95881 172 aa12.6□□□□□ -0.39
PCDHGA11-201ENST00000398587 CST2P09228 141 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms