RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CSNK2A1P68400 391 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 AKR1C1Q04828 323 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ECH1Q13011 328 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HOGA1Q86XE5 327 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 STX12Q86Y82 276 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SPAG16Q8N0X2 631 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OR56B1Q8NGI3 324 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PIGTQ969N2 578 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 NAA11Q9BSU3 229 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ST6GALNAC5Q9BVH7 336 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 GHRLQ9UBU3 117 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 CBR3O75828 277 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 IGLV3-1P01715 115 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 STARP49675 285 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TRA2AQ13595 282 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 C9orf152Q5JTZ5 239 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 MAML2Q8IZL2 1156 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PNLDC1Q8NA58 520 aaKnown RBP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TMEM185AQ8NFB2 350 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 URM1Q9BTM9 101 aaKnown RBP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OR10A2Q9H208 303 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SLC25A32Q9H2D1 315 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FOXD3Q9UJU5 478 aaPredicted RBP16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PIGLQ9Y2B2 252 aa16.07■□□□□ 0.16
CHRFAM7A-202ENST00000397827 M0R135 149 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 MFNGO00587 321 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 DHRS3O75911 302 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OTX2P32243 289 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 NTF4P34130 210 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 DUSP3P51452 185 aaPredicted RBP16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 RAC1P63000 192 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SNAI3Q3KNW1 292 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TERB2Q8NHR7 220 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZNF799Q96GE5 643 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ELL3Q9HB65 397 aaPredicted RBP16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TNFSF18Q9UNG2 199 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FCGR2AP12318 317 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TBPP20226 339 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SRSF4Q08170 494 aaKnown RBP16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 VRK1Q99986 396 aaPredicted RBP16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PIGQQ9BRB3 760 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PRR13Q9NZ81 148 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 NCKAP5O14513 1909 aa16.06■□□□□ 0.16
CHRFAM7A-202ENST00000397827 C13orf42A0A1B0GVH6 325 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 MEX3AA1L020 520 aaKnown RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 RNF222A6NCQ9 220 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SDCBPO00560 298 aaPredicted RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 CER1O95813 267 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 F10P00742 488 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FBP1P09467 338 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 MGMTP16455 207 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 RPS27AP62979 156 aaKnown RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ACER2Q5QJU3 275 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 DHRS7BQ6IAN0 325 aaPredicted RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 JMJD6Q6NYC1 403 aaPredicted RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 TXNL1O43396 289 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 DUS4LO95620 317 aaKnown RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 GPX4P36969 197 aaPredicted RBP16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 Q0VFX4 171 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SMCO1Q147U7 214 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FOXL2NBQ6ZUU3 175 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ARMC10Q8N2F6 343 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OR2AE1Q8NHA4 323 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZNF75AQ96N20 296 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 C5orf66Q9H5L9 145 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 KIAA1549Q9HCM3 1950 aa16.05■□□□□ 0.16
CHRFAM7A-202ENST00000397827 A0A0D9SG52 128 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 A0A0U1RQV5 110 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 C5orf51A6NDU8 294 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 LY86O95711 162 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 RFPL3SP0C7P2 107 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HLA-GP17693 338 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 BLVRBP30043 206 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 DLSTP36957 453 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 LUMP51884 338 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZNF133P52736 654 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FAHD2BQ6P2I3 314 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OR14L1PQ8NHC6 308 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 NTNG2Q96CW9 530 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 FAHD2AQ96GK7 314 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 V9GYS6 101 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 AHCTF1Q8WYP5 2266 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 A0A1B0GV90 55 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PATE4P0C8F1 98 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 UBBP0CG47 229 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 AMY2BP19961 511 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 OTX1P32242 354 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 THBS4P35443 961 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HIST1H3AP68431 136 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HIST2H3PS2Q5TEC6 136 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 BEND4Q6ZU67 534 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 HIST2H3AQ71DI3 136 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 KCNRGQ8N5I3 272 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 PFDN5Q99471 154 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 BARX1Q9HBU1 254 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZFP57Q9NU63 452 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ANAPC10Q9UM13 185 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 SLC25A4P12235 298 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 ZNF84P51523 738 aa16.04■□□□□ 0.16
CHRFAM7A-202ENST00000397827 B3GALT5-AS1P59052 145 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms