RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SLC22A5O76082 557 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 EIF4EP06730 217 aaKnown RBP7.23□□□□□ -1.25
PTPRD-204ENST00000397606 TBPP20226 339 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 RAB6AP20340 208 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 BEX5Q5H9J7 111 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM200AQ86VY9 491 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 MMP28Q9H239 520 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 C1orf123Q9NWV4 160 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 PLXNB3Q9ULL4 1909 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 NDUFB3O43676 98 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 ALDOBP05062 364 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 ASCL1P50553 236 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 C19orf57Q0VDD7 668 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 LRRC10Q5BKY1 277 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 TIMM23BQ5SRD1 257 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 MEX3BQ6ZN04 569 aaKnown RBP7.23□□□□□ -1.25
PTPRD-204ENST00000397606 LRRC29Q8WV35 223 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 CCL17Q92583 94 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 PIK3IP1Q96FE7 263 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 TUBD1Q9UJT1 453 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 STARD10Q9Y365 291 aa7.23□□□□□ -1.25
PTPRD-204ENST00000397606 LRP5LA4QPB2 252 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 J3QW42 95 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 GMDSO60547 372 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SC5DO75845 299 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 LALBAP00709 142 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PMP2P02689 132 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 NFYBP25208 207 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SSBP1Q04837 148 aaKnown RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 LRRC37A5PQ49AS3 106 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 AADACL3Q5VUY0 350 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 STEAP3Q658P3 488 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SLC16A12Q6ZSM3 486 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SCCPDHQ8NBX0 429 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 CNTD2Q9H8S5 307 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PPP1R3CQ9UQK1 317 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 LRRK1Q38SD2 2015 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PIEZO1Q92508 2521 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 TRIM64CA6NLI5 447 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 M0QYG6 137 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PNPP00491 289 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 HLA-AP01891 365 aaKnown RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 GAAP10253 952 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 GNB3P16520 340 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 GFRA1P56159 465 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 TLE1Q04724 770 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 LY6DQ14210 128 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 VWA1Q6PCB0 445 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 C9orf106Q8NAJ2 232 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 RAB1CQ92928 201 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 S100PBPQ96BU1 408 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 MAP6Q96JE9 813 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 AMELYQ99218 206 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 HINT2Q9BX68 163 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SAP30LQ9HAJ7 183 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SPRR3Q9UBC9 169 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PRELID3BQ9Y3B1 194 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SS18L1O75177 396 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PEX14O75381 377 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PRSS12P56730 875 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 NANOS3P60323 173 aaKnown RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SRPXP78539 464 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 FOXO1Q12778 655 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 FOXB2Q5VYV0 432 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 NUDCD2Q8WVJ2 157 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SNRNP40Q96DI7 357 aaKnown RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 MS4A3Q96HJ5 214 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 SLIRPQ9GZT3 109 aaKnown RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 OR51J1Q9H342 316 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 ZDHHC11Q9H8X9 412 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM210A6NLX4 147 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 J3QT63 122 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 CDC14BO60729 498 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 KIR3DL2P43630 455 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 MECP2P51608 486 aaKnown RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 ATXN7L3Q14CW9 347 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 GABRA6Q16445 453 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 NRARPQ7Z6K4 114 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 FAM185AQ8N0U4 392 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 C12orf45Q8N5I9 185 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 ZNF431Q8TF32 576 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 DVL3Q92997 716 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 DIRC2Q96SL1 478 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 PRDM14Q9GZV8 571 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 CHST6Q9GZX3 395 aa7.22□□□□□ -1.25
PTPRD-204ENST00000397606 RANBP3Q9H6Z4 567 aaPredicted RBP7.22□□□□□ -1.25
PTPRD-204ENST00000397606 TMEM30CPA0ZSE6 113 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 E9PLN8 166 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 CSF3P09919 207 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 OR3A4PP47883 348 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 HLXQ14774 488 aaPredicted RBP7.21□□□□□ -1.25
PTPRD-204ENST00000397606 MSMO1Q15800 293 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 KCNMB1Q16558 191 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 NDUFA5Q16718 116 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 ZBTB37Q5TC79 503 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 CDH24Q86UP0 819 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 RFLNBQ8N5W9 214 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 OR4D6Q8NGJ1 314 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 OR10AC1Q8NH08 325 aa7.21□□□□□ -1.25
PTPRD-204ENST00000397606 VKORC1Q9BQB6 163 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms