RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 LYPD4Q6UWN0 246 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 CALHM1Q8IU99 346 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 SLC15A3Q8IY34 581 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 PROKR2Q8NFJ6 384 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 OR5P3Q8WZ94 311 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 C7orf34Q96L11 122 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 RGCCQ9H4X1 137 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 ABCB10Q9NRK6 738 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 C19orf12Q9NSK7 152 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 USE1Q9NZ43 259 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
NEDD9-203ENST00000397378 ODF3BA8MYP8 253 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 GSTA4O15217 222 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 CST4P01036 141 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 SPARCP09486 303 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 COX7A1P24310 79 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 FMO3P31513 532 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 GSSP48637 474 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 LIPEQ05469 1076 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 PRDX4Q13162 271 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 TMEM200BQ69YZ2 307 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
NEDD9-203ENST00000397378 OR52J3Q8NH60 311 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 HPSE2Q8WWQ2 592 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 MYDGFQ969H8 173 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 ISOC1Q96CN7 298 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 RNF170Q96K19 258 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-203ENST00000397378 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 INTS9Q9NV88 658 aaKnown RBP7.53□□□□□ -1.2
NEDD9-203ENST00000397378 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-203ENST00000397378 ZNF319Q9P2F9 582 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
NEDD9-203ENST00000397378 RYR1P21817 5038 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 DHRS12A0PJE2 317 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF850A8MQ14 1090 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF593O00488 134 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-203ENST00000397378 MTRF1O75570 445 aaKnown RBP7.52□□□□□ -1.21
NEDD9-203ENST00000397378 CCL3L1P16619 93 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ACKR3P25106 362 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 AZGP1P25311 298 aaKnown RBP7.52□□□□□ -1.21
NEDD9-203ENST00000397378 HSD11B1P28845 292 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 CAPZA1P52907 286 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF121P58317 390 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-203ENST00000397378 SMIM11AP58511 58 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 KRT72Q14CN4 511 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 SSX2Q16385 188 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 PLA1AQ53H76 456 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 LDLRAD2Q5SZI1 272 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF626Q68DY1 528 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 KCTD8Q6ZWB6 473 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 FAM57BQ71RH2 274 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 KRT74Q7RTS7 529 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 THAP5Q7Z6K1 395 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 CENPVQ7Z7K6 275 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-203ENST00000397378 SBSPONQ8IVN8 264 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF561Q8N587 486 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 FAM86B1Q8N7N1 296 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF511Q8NB15 262 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 OR11H6Q8NGC7 330 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 OR51L1Q8NGJ5 315 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 RNF133Q8WVZ7 376 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 FAM162AQ96A26 154 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ATP6V1G3Q96LB4 118 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ARPC5LQ9BPX5 153 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF649Q9BS31 505 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 MYLK2Q9H1R3 596 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 OR10A2Q9H208 303 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 SAR1AQ9NR31 198 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 RASL12Q9NYN1 266 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 KIAA2026Q5HYC2 2103 aa7.52□□□□□ -1.21
NEDD9-203ENST00000397378 SORL1Q92673 2214 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 C17orf98A8MV24 154 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 FAM90A22PA8MWA6 464 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 H3BUI4 141 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 NME4O00746 187 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 DIRAS1O95057 198 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 GADD45GO95257 159 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 RBP4P02753 201 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 ARG1P05089 322 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
NEDD9-203ENST00000397378 IFNGR2P38484 337 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 BLVRAP53004 296 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 DLX6P56179 175 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 GNG3P63215 75 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 TSPAN31Q12999 210 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 EIF2B1Q14232 305 aaKnown RBP7.51□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF273Q14593 569 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF770Q6IQ21 691 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-203ENST00000397378 RPL13AP3Q6NVV1 102 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 ZNF782Q6ZMW2 699 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-203ENST00000397378 LHFPL2Q6ZUX7 228 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 C16orf82Q7Z2V1 217 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 TIGD4Q8IY51 512 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 ZDHHC23Q8IYP9 409 aa7.51□□□□□ -1.21
NEDD9-203ENST00000397378 CD177Q8N6Q3 437 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms