RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 MEF2DQ14814 521 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
MCF2L-205ENST00000397017 STARD10Q9Y365 291 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 TRBV5-5A0A0J9YX44 114 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 A0A1B0GV50 99 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 SCGNO76038 276 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 HPXP02790 462 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 GSK3AP49840 483 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 DLX5P56178 289 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 ZSCAN4Q8NAM6 433 aaPredicted RBP13.3□□□□□ -0.28
MCF2L-205ENST00000397017 OR6S1Q8NH40 331 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 TRAPPC2LQ9UL33 140 aa13.3□□□□□ -0.28
MCF2L-205ENST00000397017 OR6C65A6NJZ3 312 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 H7C417 338 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 SLC34A2O95436 690 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 GAAP10253 952 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 SNTB1Q13884 538 aaKnown RBP13.29□□□□□ -0.28
MCF2L-205ENST00000397017 UNQ6126/PRO20091Q6UXV3 157 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 PP6455Q8WZ26 134 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 SNAPC3Q92966 411 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 NINJ1Q92982 152 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 SCNM1Q9BWG6 230 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 DNTTIP1Q9H147 329 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 MTFP1Q9UDX5 166 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 LHX6Q9UPM6 363 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 KANTRA0A1W2PQU2 76 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 TRIM64BA6NI03 449 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 CXCL3P19876 107 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 NFYAP23511 347 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-205ENST00000397017 PTBP1P26599 531 aaKnown RBP eCLIP13.29□□□□□ -0.28
MCF2L-205ENST00000397017 ZDHHC23Q8IYP9 409 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 MRPL13Q9BYD1 178 aaKnown RBP13.29□□□□□ -0.28
MCF2L-205ENST00000397017 PRDX4Q13162 271 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 OR8G1Q15617 311 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 IGFBP7Q16270 282 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 SLC22A25Q6T423 547 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 BEND4Q6ZU67 534 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 MDP1Q86V88 176 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 C17orf78Q8N4C9 275 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 OR10S1Q8NGN2 331 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 APOBEC3DQ96AK3 386 aaPredicted RBP13.29□□□□□ -0.28
MCF2L-205ENST00000397017 SMIM3Q9BZL3 60 aa13.29□□□□□ -0.28
MCF2L-205ENST00000397017 DENND4AQ7Z401 1863 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 CFAP54Q96N23 3096 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 A0A1W2PNU3 283 aaPredicted RBP13.28□□□□□ -0.28
MCF2L-205ENST00000397017 XRCC2O43543 280 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 BPNT1O95861 308 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 IGF2P01344 180 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 RLN2P04090 185 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 HNF4GQ14541 408 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 PIGYQ3MUY2 71 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 FGFBP3Q8TAT2 258 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 ZNF2Q9BSG1 426 aaPredicted RBP13.28□□□□□ -0.28
MCF2L-205ENST00000397017 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 SLC6A1P30531 599 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 ENDOGQ14249 297 aaKnown RBP13.28□□□□□ -0.28
MCF2L-205ENST00000397017 PLA2G2CQ5R387 149 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 GSG1LQ6UXU4 331 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 MFFQ9GZY8 342 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 CDC14BO60729 498 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 SELEP16581 610 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 THBS4P35443 961 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 GRK1Q15835 563 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 PAN3Q58A45 887 aaKnown RBP13.28□□□□□ -0.28
MCF2L-205ENST00000397017 SUMF1Q8NBK3 374 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 CHST6Q9GZX3 395 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 OPN3Q9H1Y3 402 aaPredicted RBP13.28□□□□□ -0.28
MCF2L-205ENST00000397017 BCO1Q9HAY6 547 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 MSL2Q9HCI7 577 aa13.28□□□□□ -0.28
MCF2L-205ENST00000397017 PRAF2O60831 178 aa13.27□□□□□ -0.28
MCF2L-205ENST00000397017 TNFSF10P50591 281 aa13.27□□□□□ -0.28
MCF2L-205ENST00000397017 HACD4Q5VWC8 232 aa13.27□□□□□ -0.28
MCF2L-205ENST00000397017 SGPP2Q8IWX5 399 aa13.27□□□□□ -0.28
MCF2L-205ENST00000397017 FAM234AQ9H0X4 552 aa13.27□□□□□ -0.28
MCF2L-205ENST00000397017 NOTCH2Q04721 2471 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 GEMIN2O14893 280 aaKnown RBP13.27□□□□□ -0.29
MCF2L-205ENST00000397017 ACTL6AO96019 429 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 EDDM3BP56851 147 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 DYRK1AQ13627 763 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 SP6Q3SY56 376 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 FBXW9Q5XUX1 488 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 UNQ9370/PRO34162Q6UXP9 181 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 NHLRC1Q6VVB1 395 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 TINAGQ9UJW2 476 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 TMEM131Q92545 1883 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 CRYAAP02489 173 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 CEBPGP53567 150 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 C1QL2Q7Z5L3 287 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 OSR2Q8N2R0 312 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 OR2J1Q9GZK6 312 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 ZNF286AQ9HBT8 521 aa13.27□□□□□ -0.29
MCF2L-205ENST00000397017 TNFSF12O43508 249 aa13.26□□□□□ -0.29
MCF2L-205ENST00000397017 IGHV3-13P01766 116 aa13.26□□□□□ -0.29
MCF2L-205ENST00000397017 IGHV3-7P01780 117 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms