RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DYRK2Q92630 601 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 MVB12AQ96EY5 273 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 ALKBH4Q9NXW9 302 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 IGHV1OR15-9A0A0B4J2B8 117 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 hCG_1809904A0A1W2PP81 198 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 A0A1W2PR64 198 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 A0A1W2PRV1 198 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 NME2P1O60361 137 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 CST4P01036 141 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 DBHP09172 617 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 ZNF501Q96CX3 271 aaPredicted RBP12.19□□□□□ -0.46
NUP98-204ENST00000397004 REEP6Q96HR9 211 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 WDR77Q9BQA1 342 aaPredicted RBP12.19□□□□□ -0.46
NUP98-204ENST00000397004 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
NUP98-204ENST00000397004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.19□□□□□ -0.46
NUP98-204ENST00000397004 TUBD1Q9UJT1 453 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 MTCH2Q9Y6C9 303 aa12.19□□□□□ -0.46
NUP98-204ENST00000397004 UBE2CO00762 179 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 SCGNO76038 276 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 QDPRP09417 244 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 DVL1P1P54792 670 aaPredicted RBP12.18□□□□□ -0.46
NUP98-204ENST00000397004 AWAT1Q58HT5 328 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 SKA3Q8IX90 412 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 D2HGDHQ8N465 521 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 OR10G3Q8NGC4 313 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 GNRHR2Q96P88 292 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 GPER1Q99527 375 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 RAB33BQ9H082 229 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 C8orf33Q9H7E9 229 aaPredicted RBP12.18□□□□□ -0.46
NUP98-204ENST00000397004 A0A1W2PPH5 198 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 MBPP02686 304 aaPredicted RBP12.18□□□□□ -0.46
NUP98-204ENST00000397004 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 C5orf46Q6UWT4 87 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 ZNF2Q9BSG1 426 aaPredicted RBP12.18□□□□□ -0.46
NUP98-204ENST00000397004 ARG1P05089 322 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 ZNF43P17038 809 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 PTAFRP25105 342 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 SNCAP37840 140 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 CLRN1P58418 232 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 MIDNQ504T8 468 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 STT3BQ8TCJ2 826 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 DDIT4LQ96D03 193 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 ZDHHC12Q96GR4 267 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 ARV1Q9H2C2 271 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 ZNF576Q9H609 170 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 SDK2Q58EX2 2172 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 C7orf77A4D0Y5 90 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 OR5H15A6NDH6 313 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 PRF1P14222 555 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 OR3A2P47893 321 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 UCP2P55851 309 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 C14orf28Q4W4Y0 310 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 OGFOD3Q6PK18 319 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 ZNF837Q96EG3 531 aaPredicted RBP12.18□□□□□ -0.46
NUP98-204ENST00000397004 B3GALT1Q9Y5Z6 326 aa12.18□□□□□ -0.46
NUP98-204ENST00000397004 A0A1B0GX78 115 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 IFNA4P05014 189 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 OR8U8P0C7N1 319 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 PAX6P26367 422 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 ASCL1P50553 236 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 ACTBL2Q562R1 376 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 PIGTQ969N2 578 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 SPSB2Q99619 263 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 PRRX2Q99811 253 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 LSM5Q9Y4Y9 91 aaKnown RBP12.17□□□□□ -0.46
NUP98-204ENST00000397004 IGKV1-27A0A075B6S5 117 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 K7EPK0 472 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 XRCC2O43543 280 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 IFNA2P01563 188 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 RPUSD3Q6P087 351 aaKnown RBP12.17□□□□□ -0.46
NUP98-204ENST00000397004 C20orf196Q8IYI0 205 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 FAM71E2Q8N5Q1 922 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 PLPP5Q8NEB5 264 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 EMG1Q92979 244 aaKnown RBP12.17□□□□□ -0.46
NUP98-204ENST00000397004 SMCO4Q9NRQ5 59 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 ZNF701Q9NV72 531 aaPredicted RBP12.17□□□□□ -0.46
NUP98-204ENST00000397004 RCL1Q9Y2P8 373 aaKnown RBP12.17□□□□□ -0.46
NUP98-204ENST00000397004 POLR1DQ9Y2S0 133 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 VSTM2BA6NLU5 285 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 DIRAS3O95661 229 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 GIMD1P0DJR0 217 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
NUP98-204ENST00000397004 SLC16A14Q7RTX9 510 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 ANKRD37Q7Z713 158 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 OR52M1Q8NGK5 317 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 EDARQ9UNE0 448 aa12.17□□□□□ -0.46
NUP98-204ENST00000397004 SNRNP70P08621 437 aaKnown RBP12.16□□□□□ -0.46
NUP98-204ENST00000397004 CD38P28907 300 aa12.16□□□□□ -0.46
NUP98-204ENST00000397004 SFTPDP35247 375 aa12.16□□□□□ -0.46
NUP98-204ENST00000397004 LYZL2Q7Z4W2 148 aa12.16□□□□□ -0.46
NUP98-204ENST00000397004 FAAP24Q9BTP7 215 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms