RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TMEM72A0PK05 275 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 NCF1BA6NI72 391 aaPredicted RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 CENPXA8MT69 81 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 NCF1CA8MVU1 366 aaPredicted RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 ZNF99A8MXY4 864 aaPredicted RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 ZNF878C9JN71 531 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 H0YIV9 168 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 DFFAO00273 331 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 CASC3O15234 703 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 NRASP01111 189 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 HRASP01112 189 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 KRASP01116 189 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 KLK1P06870 262 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 TAS2R39P59534 338 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 GRB2P62993 217 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 SLC35A1P78382 337 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 RPL18AQ02543 176 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 MAPRE2Q15555 327 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 FAM104BQ5XKR9 115 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 THOC7Q6I9Y2 204 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 APOBEC3HQ6NTF7 200 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 WDR59Q6PJI9 974 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 DAW1Q8N136 415 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 CYB561A3Q8NBI2 242 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 ISG20Q96AZ6 181 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 MRPL48Q96GC5 212 aaKnown RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 SMARCD1Q96GM5 515 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 NAPGQ99747 312 aaPredicted RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 PDCD1LG2Q9BQ51 273 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 STMN4Q9H169 189 aaPredicted RBP1.72□□□□□ -2.13
CMC1-202ENST00000396610 BLZF1Q9H2G9 400 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 OR51B5Q9H339 312 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 HMGXB4Q9UGU5 601 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 PPIL1Q9Y3C6 166 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 RHBDD3Q9Y3P4 386 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 ENPP4Q9Y6X5 453 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 PCNX2A6NKB5 2137 aa1.72□□□□□ -2.13
CMC1-202ENST00000396610 SCN4AP35499 1836 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 TRAV8-4A0A0B4J246 113 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 TRAV8-6A0A0B4J262 113 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 A0A0G2JMP0 313 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 A0A0X1KG70 313 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 GOLGA6L4A6NEF3 574 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 P01737 135 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 SLC35G6P0C7Q6 338 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 SFTPCP11686 197 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 TUBG1P23258 451 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 HLA-DMAP28067 261 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 ACOT2P49753 483 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 DAOAP59103 153 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 LCN2P80188 198 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 SPAG1Q07617 926 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 SLC9A3R2Q15599 337 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 PYDC2Q56P42 97 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 ZFAND6Q6FIF0 208 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 MORN3Q6PF18 240 aaPredicted RBP1.71□□□□□ -2.14
CMC1-202ENST00000396610 SMARCD3Q6STE5 483 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 MRPL21Q7Z2W9 205 aaKnown RBP1.71□□□□□ -2.14
CMC1-202ENST00000396610 LRRC8AQ8IWT6 810 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 RNF10Q8N5U6 811 aaKnown RBP1.71□□□□□ -2.14
CMC1-202ENST00000396610 OR10Z1Q8NGY1 313 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 ZNF420Q8TAQ5 688 aaPredicted RBP1.71□□□□□ -2.14
CMC1-202ENST00000396610 TMEM234Q8WY98 164 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 PEX13Q92968 403 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 YIPF6Q96EC8 236 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 IL22Q9GZX6 179 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 OR2AG1Q9H205 316 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 ZNF302Q9NR11 478 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 TUBG2Q9NRH3 451 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 VAX2Q9UIW0 290 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 PSME2Q9UL46 239 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 KLF12Q9Y4X4 402 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 SLC22A7Q9Y694 548 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 JCADQ9P266 1359 aa1.71□□□□□ -2.14
CMC1-202ENST00000396610 PLXNB1O43157 2135 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 TTC41PQ6P2S7 1318 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 BAZ2AQ9UIF9 1905 aaKnown RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 IZUMO1RA6ND01 250 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 SMC2O95347 1197 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 PTTG1O95997 202 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 RGS6P49758 472 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 MTPNP58546 118 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 C2orf54Q08AI8 447 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 LAMTOR4Q0VGL1 99 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 TRDNQ13061 729 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 LIN9Q5TKA1 542 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 ZNF660Q6AZW8 331 aaPredicted RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 USP50Q70EL3 339 aaPredicted RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 SLC7A5P1Q8MH63 180 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 ZFP62Q8NB50 900 aaPredicted RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 OR8D1Q8WZ84 308 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 API5Q9BZZ5 524 aaKnown RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 ASF1BQ9NVP2 202 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 RABL2AQ9UBK7 228 aaPredicted RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 ZMAT5Q9UDW3 170 aaKnown RBP1.7□□□□□ -2.14
CMC1-202ENST00000396610 THADAQ6YHU6 1953 aa1.7□□□□□ -2.14
CMC1-202ENST00000396610 J3QRE1 110 aa1.69□□□□□ -2.14
CMC1-202ENST00000396610 OR5AC1P0C628 307 aa1.69□□□□□ -2.14
CMC1-202ENST00000396610 HLA-GP17693 338 aa1.69□□□□□ -2.14
CMC1-202ENST00000396610 CFHR2P36980 270 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms