RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 PPIAL4DF5H284 164 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 C3orf80F5H4A9 247 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 CDIPTO14735 213 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 HSMCR30P0CW71 290 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 PPIAL4FP0DN26 164 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 EGR1P18146 543 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 CELP19835 753 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 MDH2P40926 338 aaKnown RBP13.88□□□□□ -0.19
CXCL1-201ENST00000395761 ALDH3B2P48448 385 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 GP2P55259 537 aaKnown RBP13.88□□□□□ -0.19
CXCL1-201ENST00000395761 FAM76BQ5HYJ3 339 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 CLVS2Q5SYC1 327 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 PLCXD3Q63HM9 321 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 C1orf87Q8N0U7 546 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 SCCPDHQ8NBX0 429 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 DEFB108BQ8NET1 73 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 OR51A4Q8NGJ6 313 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 OR5AK2Q8NH90 309 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 UFD1Q92890 307 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 TLNRD1Q9H1K6 362 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
CXCL1-201ENST00000395761 ZFPL1O95159 310 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 TGFAP01135 160 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 LHBP01229 141 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 PSMB9P28065 219 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 CD80P33681 288 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 GNG3P63215 75 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 TMEM155Q4W5P6 130 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 SFRP4Q6FHJ7 346 aaPredicted RBP13.87□□□□□ -0.19
CXCL1-201ENST00000395761 WDR82Q6UXN9 313 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 GCSAMQ8N6F7 178 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 ZNF676Q8N7Q3 588 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 LINC01356Q8N9X3 169 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 OR5A2Q8NGI9 324 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 LRRC29Q8WV35 223 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 GHSRQ92847 366 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 ADAT3Q96EY9 351 aaPredicted RBP13.87□□□□□ -0.19
CXCL1-201ENST00000395761 PGLYRP3Q96LB9 341 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 PDCD1LG2Q9BQ51 273 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 COMMD4Q9H0A8 199 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 OR51I2Q9H344 312 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 PLEKHA1Q9HB21 404 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 LPAR2Q9HBW0 351 aa13.87□□□□□ -0.19
CXCL1-201ENST00000395761 ANKRD61A6NGH8 418 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 TMEM210A6NLX4 147 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 INAFM1C9JVW0 142 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 RPL5P46777 297 aaKnown RBP13.86□□□□□ -0.19
CXCL1-201ENST00000395761 UBE2V2Q15819 145 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 SSX1Q16384 188 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 MUC20Q8N307 709 aaPredicted RBP13.86□□□□□ -0.19
CXCL1-201ENST00000395761 SPICQ8N5J4 248 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 MS4A15Q8N5U1 240 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 ZFP41Q8N8Y5 198 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 FGGYQ96C11 551 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 RAB39BQ96DA2 213 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 TMEM246Q9BRR3 403 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 PATZ1Q9HBE1 687 aaKnown RBP13.86□□□□□ -0.19
CXCL1-201ENST00000395761 HHLA2Q9UM44 414 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 PCDHB10Q9UN67 800 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 ZNF281Q9Y2X9 895 aa13.86□□□□□ -0.19
CXCL1-201ENST00000395761 SF3B6Q9Y3B4 125 aaKnown RBP13.86□□□□□ -0.19
CXCL1-201ENST00000395761 NSD1Q96L73 2696 aaPredicted RBP13.86□□□□□ -0.19
CXCL1-201ENST00000395761 OR5B21A6NL26 309 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 CEACAM18A8MTB9 384 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 A8MV72 311 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-201ENST00000395761 B4DSR2 109 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 CCRL2O00421 344 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 RHBDL1O75783 438 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 FSTL3O95633 263 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 SEC61A1P61619 476 aaKnown RBP13.85□□□□□ -0.19
CXCL1-201ENST00000395761 TRAM1Q15629 374 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 ZNF404Q494X3 552 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 FAM166AQ6J272 317 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 LYPD2Q6UXB3 125 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 OR13F1Q8NGS4 319 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 NPRL2Q8WTW4 380 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 RGP1Q92546 391 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-201ENST00000395761 SEH1LQ96EE3 360 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 CHST5Q9GZS9 411 aa13.85□□□□□ -0.19
CXCL1-201ENST00000395761 SETD2Q9BYW2 2564 aaPredicted RBP13.85□□□□□ -0.19
CXCL1-201ENST00000395761 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 ANK3Q12955 4377 aaKnown RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 IGHV3OR15-7A0A075B7D8 119 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 PQLC2LA1A4F0 135 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 OOEPA6NGQ2 149 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 LGALS8O00214 317 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 WNT2P09544 360 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 ZNF12P17014 697 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 PSMA1P25786 263 aaKnown RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 ZFP36P26651 326 aaKnown RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 CFHR2P36980 270 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 GMFBP60983 142 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 RPS11P62280 158 aaKnown RBP eCLIP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 YIF1BQ5BJH7 314 aa13.84□□□□□ -0.19
CXCL1-201ENST00000395761 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
CXCL1-201ENST00000395761 OR13C3Q8NGS6 347 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms