RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 DUS4LO95620 317 aaKnown RBP11.71□□□□□ -0.53
NFKB1-202ENST00000394820 IGHG1P01857 330 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 OR5H8P0DN80 308 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 RAB11AP62491 216 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 MFAP5Q13361 173 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 GRINAQ7Z429 371 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 PBDC1Q9BVG4 233 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 PRRG4Q9BZD6 226 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 PADI1Q9ULC6 663 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 ICAM5Q9UMF0 924 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 DOCK10Q96BY6 2186 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 RAB27BO00194 218 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 PNLIPRP2P54317 469 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 FUT7Q11130 342 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 PGAP1Q75T13 922 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 BIVMQ86UB2 503 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 CA5BP1Q8WTZ4 195 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 SLC19A3Q9BZV2 496 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 C1orf123Q9NWV4 160 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 WNT16Q9UBV4 365 aa11.71□□□□□ -0.54
NFKB1-202ENST00000394820 MUC22E2RYF6 1773 aaPredicted RBP11.71□□□□□ -0.54
NFKB1-202ENST00000394820 SLC34A2O95436 690 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 CFIP05156 583 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 ZNF728P0DKX0 622 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 IDH3GP51553 393 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 SLC25A42Q86VD7 318 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 PLXDC1Q8IUK5 500 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 LILRB1Q8NHL6 650 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 C2orf50Q96LR7 162 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 CRLF2Q9HC73 371 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 ZNF275Q9NSD4 429 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 NOVA1P51513 510 aaKnown RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 TDHQ8IZJ6 230 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 RHOVQ96L33 236 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 ZCCHC4Q9H5U6 513 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 UNKLQ9H9P5 680 aaKnown RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 LPAR3Q9UBY5 353 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 CACNA1HO95180 2353 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 TRBV5-5A0A0J9YX44 114 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 OR5H15A6NDH6 313 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 A6NIZ1 184 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 SSSCA1O60232 199 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 FBP1P09467 338 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 ZBTB25P24278 435 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 AFF3P51826 1226 aaKnown RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 RAP1BP61224 184 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 RAP1AP62834 184 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 RIPPLY1Q0D2K3 151 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 ANKRD55Q3KP44 614 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 RTN4IP1Q8WWV3 396 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-202ENST00000394820 VN1R1Q9GZP7 353 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 GNG13Q9P2W3 67 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 RFNGQ9Y644 331 aa11.7□□□□□ -0.54
NFKB1-202ENST00000394820 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 PHOX2AO14813 284 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 CYB5BO43169 146 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 NHLH2Q02577 135 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 MPPED2Q15777 294 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 MOB3CQ70IA8 216 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 NKAIN3Q8N8D7 197 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 OCSTAMPQ9BR26 566 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 MMP26Q9NRE1 261 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 LMO7DNF2Z398 122 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 HSD17B6O14756 317 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 BCAT2O15382 392 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-202ENST00000394820 IL33O95760 270 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 SRFP11831 508 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 ELLP55199 621 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-202ENST00000394820 FHL1Q13642 323 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 SSX9Q7RTT3 188 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 C9orf40Q8IXQ3 194 aa11.69□□□□□ -0.54
NFKB1-202ENST00000394820 MASP2O00187 686 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 ASAH2BP0C7U1 165 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 FASLGP48023 281 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 LPAL2Q16609 132 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 DHRS11Q6UWP2 260 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 SDSLQ96GA7 329 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 CMTM3Q96MX0 182 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 OR6C1Q96RD1 312 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 H0YIZ8 118 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 OR2J2O76002 312 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
NFKB1-202ENST00000394820 KISS1Q15726 138 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 GGNBP1Q5YKI7 109 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 LYZL2Q7Z4W2 148 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 FRZBQ92765 325 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 BSCL2Q96G97 398 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-202ENST00000394820 ULBP2Q9BZM5 246 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 DKKL1Q9UK85 242 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 PLPP3O14495 311 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 OR5AC1P0C628 307 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 CHATP28329 748 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 MYBPHQ13203 477 aa11.68□□□□□ -0.54
NFKB1-202ENST00000394820 CSRP2Q16527 193 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms