RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 TMEM65Q6PI78 240 aa16.19■□□□□ 0.18
SIL1-202ENST00000394817 ELL3Q9HB65 397 aaPredicted RBP16.19■□□□□ 0.18
SIL1-202ENST00000394817 FREM1Q5H8C1 2179 aa16.19■□□□□ 0.18
SIL1-202ENST00000394817 ZFHX2Q9C0A1 2572 aaPredicted RBP16.18■□□□□ 0.18
SIL1-202ENST00000394817 hCG_38984A0A1B0GV85 526 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 MRPL33O75394 65 aaKnown RBP16.18■□□□□ 0.18
SIL1-202ENST00000394817 AKR1C4P17516 323 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 VAMP1P23763 118 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 P2RX3P56373 397 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 STK11Q15831 433 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 LHFPL1Q86WI0 220 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 MARVELD3Q96A59 401 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 LRFN3Q9BTN0 628 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 MFFQ9GZY8 342 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 ATPIF1Q9UII2 106 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 KIF25Q9UIL4 384 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 GPR132Q9UNW8 380 aa16.18■□□□□ 0.18
SIL1-202ENST00000394817 CCSO14618 274 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 MAGEA5P43359 124 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 SNU13P55769 128 aaKnown RBP16.17■□□□□ 0.18
SIL1-202ENST00000394817 TMEM128Q5BJH2 165 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 GSG1LQ6UXU4 331 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 LHFPL2Q6ZUX7 228 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 PEG10Q86TG7 708 aaKnown RBP16.17■□□□□ 0.18
SIL1-202ENST00000394817 TMEM185AQ8NFB2 350 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 ANGPTL6Q8NI99 470 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 PDCD10Q9BUL8 212 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 CNOT1A5YKK6 2376 aaKnown RBP16.17■□□□□ 0.18
SIL1-202ENST00000394817 IGKV1-27A0A075B6S5 117 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 DBX1A6NMT0 343 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 TMEM225BP0DP42 221 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 RRASP10301 218 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 FPR2P25090 351 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 MPGP29372 298 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 SRYQ05066 204 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 TGIF1Q15583 401 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 OR8B8Q15620 311 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 PLXDC2Q6UX71 529 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 LINC00696Q6ZRV3 163 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 COMMD7Q86VX2 200 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 TMEM17Q86X19 198 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 OR6K3Q8NGY3 331 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 PCNPQ8WW12 178 aaKnown RBP16.17■□□□□ 0.18
SIL1-202ENST00000394817 METTL9Q9H1A3 318 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 SLC6A15Q9H2J7 730 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 C5orf66Q9H5L9 145 aa16.17■□□□□ 0.18
SIL1-202ENST00000394817 ARHGAP21Q5T5U3 1957 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 FAM166BA8MTA8 275 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 SLC25A4P12235 298 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 CALCRP30988 508 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 RBP2P50120 134 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 FAM3AP98173 230 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 TOR2AQ5JU69 321 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 ASCL4Q6XD76 172 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 ZNF546Q86UE3 836 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 TMEM251Q8N6I4 163 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 IL22RA1Q8N6P7 574 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 CSNK2A3Q8NEV1 391 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 SCGB3A2Q96PL1 93 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 ST6GALNAC5Q9BVH7 336 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 SLC7A10Q9NS82 523 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 PARPBPQ9NWS1 579 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 PLA2G3Q9NZ20 509 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 COMMD9Q9P000 198 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 PTPRBP23467 1997 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 DNAJC13O75165 2243 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 ZNF407Q9C0G0 2248 aa16.16■□□□□ 0.18
SIL1-202ENST00000394817 RIF1Q5UIP0 2472 aaKnown RBP16.16■□□□□ 0.18
SIL1-202ENST00000394817 FAM230AA0A1W2PPH8 454 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 FIGNL2A6NMB9 653 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 RPL36A-HNRNPH2H7BZ11 118 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 XRCC2O43543 280 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 SYNGR4O95473 234 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 NRASP01111 189 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 IGHV3-9P01782 118 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 NBL1P41271 181 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 OR3A2P47893 321 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 NPY4RP50391 375 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 ZNF92Q03936 586 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 ZNF345Q14585 488 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 PABPC1L2AQ5JQF8 200 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 C11orf87Q6NUJ2 197 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 OR5AP2Q8NGF4 316 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 OR13G1Q8NGZ3 307 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 SCARB1Q8WTV0 552 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 CASTOR1Q8WTX7 329 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 PPP1R1CQ8WVI7 109 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 SPSB4Q96A44 273 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 TMEM230Q96A57 120 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 BORCS8Q96FH0 119 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 FER1L6-AS2Q96M78 137 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 C1QTNF5Q9BXJ0 243 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 PRDM14Q9GZV8 571 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 OSGIN2Q9Y236 505 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 CELSR3Q9NYQ7 3312 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 EDN3P14138 238 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 GABRR1P24046 479 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 RSU1Q15404 277 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 ATP1A1-AS1Q5TC04 95 aa16.15■□□□□ 0.18
SIL1-202ENST00000394817 AADACL3Q5VUY0 350 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms