RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 TSC22D2O75157 780 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 BAMBIQ13145 260 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 ACSF3Q4G176 576 aaPredicted RBP17.56■□□□□ 0.4
PRKCD-202ENST00000394729 C4orf46Q504U0 113 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 CLVS2Q5SYC1 327 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 C5orf24Q7Z6I8 188 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 OR51F2Q8NH61 342 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 GRPEL2Q8TAA5 225 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 FAAP24Q9BTP7 215 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 DKK4Q9UBT3 224 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 KIAA2026Q5HYC2 2103 aa17.56■□□□□ 0.4
PRKCD-202ENST00000394729 F8VVB4 439 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 F8VWA3 439 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 GEMIN2O14893 280 aaKnown RBP17.55■□□□□ 0.4
PRKCD-202ENST00000394729 FABP7O15540 132 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 OPRM1P35372 400 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 ALKBH6Q3KRA9 238 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 LIN54Q6MZP7 749 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 FBXL14Q8N1E6 418 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 AQP3Q92482 292 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 BCL2L2Q92843 193 aaPredicted RBP17.55■□□□□ 0.4
PRKCD-202ENST00000394729 C1QTNF5Q9BXJ0 243 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 CACNA1DQ01668 2161 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 CEACAM4O75871 244 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 VSIG10L2P0DP72 767 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 PRF1P14222 555 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 CA6P23280 308 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 ACTBP60709 375 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 ACTG1P63261 375 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 HACD4Q5VWC8 232 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 SLAMF9Q96A28 289 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 PLEKHJ1Q9NW61 149 aa17.55■□□□□ 0.4
PRKCD-202ENST00000394729 SPTBN1Q01082 2364 aaKnown RBP17.55■□□□□ 0.4
PRKCD-202ENST00000394729 MKRN2OSH3BPM6 223 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 CFPP27918 469 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 FAUP35544 74 aaKnown RBP17.54■□□□□ 0.4
PRKCD-202ENST00000394729 MALLQ13021 153 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 PRDX4Q13162 271 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 TMEM53Q6P2H8 277 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 URM1Q9BTM9 101 aaKnown RBP17.54■□□□□ 0.4
PRKCD-202ENST00000394729 OR2J1Q9GZK6 312 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 SLC7A11Q9UPY5 501 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 UBE2QL1A1L167 161 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 HIST1H1DP16402 221 aaKnown RBP17.54■□□□□ 0.4
PRKCD-202ENST00000394729 TAS2R19P59542 299 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 RNASE10Q5GAN6 216 aaKnown RBP17.54■□□□□ 0.4
PRKCD-202ENST00000394729 SEM1Q6ZVN7 128 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 ZNF611Q8N823 705 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 RYDENQ9NUL5 291 aaKnown RBP17.54■□□□□ 0.4
PRKCD-202ENST00000394729 PLEKHA6Q9Y2H5 1048 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 LRBAP50851 2863 aa17.54■□□□□ 0.4
PRKCD-202ENST00000394729 ZNF816-ZNF321PA0A0X1KG74 233 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 AQP7O14520 342 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 RAB6AP20340 208 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 PTGER4P35408 488 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 RAB12Q6IQ22 244 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 CXorf67Q86X51 503 aaPredicted RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 SSC4DQ8WTU2 575 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 C15orf40Q8WUR7 153 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 FGF23Q9GZV9 251 aaPredicted RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 CA10Q9NS85 328 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 SHANK1Q9Y566 2161 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 FAM172BPA6NC97 362 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 OR6C65A6NJZ3 312 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 ICMTO60725 284 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 BMP5P22003 454 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 ARR3P36575 388 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 Q5BKY6 102 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 SNAPC3Q92966 411 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 KCNN3Q9UGI6 736 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 RAXQ9Y2V3 346 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 AKR7A2O43488 359 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 OR7C1O76099 320 aaPredicted RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 NDUFB6O95139 128 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 SERPINA5P05154 406 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 CD37P11049 281 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 RPS27AP62979 156 aaKnown RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 CNN3Q15417 329 aaKnown RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 SF3B4Q15427 424 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■■■ 30.2
PRKCD-202ENST00000394729 RBMS2Q15434 407 aaKnown RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 APOBEC3DQ96AK3 386 aaPredicted RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 MOV10Q9HCE1 1003 aaKnown RBP17.53■□□□□ 0.4
PRKCD-202ENST00000394729 COPZ2Q9P299 210 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 TINAGQ9UJW2 476 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 ZNF175Q9Y473 711 aa17.53■□□□□ 0.4
PRKCD-202ENST00000394729 ZNF732B4DXR9 585 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 PROB1E7EW31 1015 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 XRCC2O43543 280 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 NOS1APO75052 506 aaPredicted RBP17.52■□□□□ 0.4
PRKCD-202ENST00000394729 SS18L1O75177 396 aaPredicted RBP17.52■□□□□ 0.4
PRKCD-202ENST00000394729 HOXC12P31275 282 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 TSPAN5P62079 268 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 TGFBR3Q03167 851 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 Q6ZS92 163 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 C17orf78Q8N4C9 275 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 FBXW5Q969U6 566 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 PRR13Q9NZ81 148 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 NPAP1Q9NZP6 1156 aa17.52■□□□□ 0.4
PRKCD-202ENST00000394729 OR56B1Q8NGI3 324 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms