RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF845Q96IR2 970 aaPredicted RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 FANCMQ8IYD8 2048 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 ST8SIA3O43173 380 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 MUC1P15941 1255 aaPredicted RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 GGNBP1Q5YKI7 109 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 DYRK2Q92630 601 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 S100PBPQ96BU1 408 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 C5orf66Q9H5L9 145 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF576Q9H609 170 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 MYOTQ9UBF9 498 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 DHHO43323 396 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 ARG1P05089 322 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 CNN3Q15417 329 aaKnown RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 HAGHQ16775 308 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 EIF2S3LQ2VIR3 472 aaKnown RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 ANKRD55Q3KP44 614 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 SYT13Q7L8C5 426 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 FBXL14Q8N1E6 418 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 KCNK17Q96T54 332 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 UTP23Q9BRU9 249 aaKnown RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 NECAP2Q9NVZ3 263 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 KCNS2Q9ULS6 477 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 CD8AP01732 235 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 B4GALT1P15291 398 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 DUSP1P28562 367 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 SRSF3P84103 164 aaKnown RBP14.24□□□□□ -0.13
PCDH1-203ENST00000394536 FAHD2BQ6P2I3 314 aaPredicted RBP14.24□□□□□ -0.13
PCDH1-203ENST00000394536 OPN5Q6U736 354 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 MRPL24Q96A35 216 aaKnown RBP14.24□□□□□ -0.13
PCDH1-203ENST00000394536 FAHD2AQ96GK7 314 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 RSRP1Q9BUV0 290 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 CYB5R1Q9UHQ9 305 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 CD74P04233 296 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 EIF1P41567 113 aaKnown RBP14.24□□□□□ -0.13
PCDH1-203ENST00000394536 RBP2P50120 134 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 RNF144BQ7Z419 303 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 ANKRD37Q7Z713 158 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 FAM24BQ8N5W8 94 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 IGHV3-64DA0A0J9YX35 117 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 PRSS44E7EML9 344 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 TAAR5O14804 337 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 ZNHIT1O43257 154 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 RPUSD3Q6P087 351 aaKnown RBP14.24□□□□□ -0.13
PCDH1-203ENST00000394536 MAML2Q8IZL2 1156 aaPredicted RBP14.24□□□□□ -0.13
PCDH1-203ENST00000394536 OR5T1Q8NG75 326 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 OR2G3Q8NGZ4 309 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 NMES1Q9C002 83 aa14.24□□□□□ -0.13
PCDH1-203ENST00000394536 C1QL1O75973 258 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 CST7O76096 145 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 CD79AP11912 226 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 NQO2P16083 231 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 GALNSP34059 522 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 CSRP2Q16527 193 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 LPAL2Q16609 132 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 PNLIPRP3Q17RR3 467 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 PDZD11Q5EBL8 140 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 FNDC7Q5VTL7 733 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 TMEM268Q5VZI3 342 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 PLXDC2Q6UX71 529 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 HOGA1Q86XE5 327 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 ZFP62Q8NB50 900 aaPredicted RBP14.23□□□□□ -0.13
PCDH1-203ENST00000394536 SCGB1C1Q8TD33 95 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 SFT2D1Q8WV19 159 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 GPR132Q9UNW8 380 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 ST3GAL6Q9Y274 331 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 KPTNQ9Y664 436 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 NSG1A0A0A6YYJ2 146 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 CST4P01036 141 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 TK1P04183 234 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF735P0CB33 412 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 BEND4Q6ZU67 534 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 LGI3Q8N145 548 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 RXFP4Q8TDU9 374 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 RRNAD1Q96FB5 475 aaKnown RBP14.23□□□□□ -0.13
PCDH1-203ENST00000394536 FAM206AQ9NX38 181 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 EP300Q09472 2414 aaPredicted RBP14.23□□□□□ -0.13
PCDH1-203ENST00000394536 SERPINE3A8MV23 424 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 RAMP1O60894 148 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 IFNA5P01569 189 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 UBE2KP61086 200 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 SHBQ15464 509 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 IL34Q6ZMJ4 242 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 OR13G1Q8NGZ3 307 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 SPACA9Q96E40 222 aaPredicted RBP14.23□□□□□ -0.13
PCDH1-203ENST00000394536 UCN2Q96RP3 112 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 LHFPL6Q9Y693 200 aa14.23□□□□□ -0.13
PCDH1-203ENST00000394536 H3BP45 60 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 TNFSF11O14788 317 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 SERPINE2P07093 398 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 IFI6P09912 130 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 OR5AC1P0C628 307 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 GUK1Q16774 197 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 C1QL2Q7Z5L3 287 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 SLC25A43Q8WUT9 341 aaPredicted RBP14.22□□□□□ -0.13
PCDH1-203ENST00000394536 SGK3Q96BR1 496 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 PECRQ9BY49 303 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 FSCN3Q9NQT6 498 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 AUP1Q9Y679 476 aa14.22□□□□□ -0.13
PCDH1-203ENST00000394536 IFNA17P01571 189 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms