RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MRPS18CQ9Y3D5 142 aaKnown RBP16.67■□□□□ 0.26
HOXC6-202ENST00000394331 ROM1Q03395 351 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 OIT3Q8WWZ8 545 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 K7N7A8 449 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 WBP2NLQ6ICG8 309 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 JAGN1Q8N5M9 183 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 BSCL2Q96G97 398 aaPredicted RBP16.66■□□□□ 0.26
HOXC6-202ENST00000394331 NKX3-1Q99801 234 aaPredicted RBP16.66■□□□□ 0.26
HOXC6-202ENST00000394331 DKKL1Q9UK85 242 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 CDH23Q9H251 3354 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 RBFOX3A6NFN3 312 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 BPNT1O95861 308 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 IGLV3-19P01714 112 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 AMBPP02760 352 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 EPHA1P21709 976 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 GALNSP34059 522 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 QRFPP83859 136 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 ZNF117Q03924 483 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 FOXD3Q9UJU5 478 aaPredicted RBP16.66■□□□□ 0.26
HOXC6-202ENST00000394331 V9GYS6 101 aa16.66■□□□□ 0.26
HOXC6-202ENST00000394331 FTCDNL1E5RQL4 147 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 CLDN6P56747 220 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 CATSPERDQ86XM0 798 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 CHST4Q8NCG5 386 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 OR4D6Q8NGJ1 314 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 KLHDC7BQ96G42 594 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 CDH20Q9HBT6 801 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 C1orf123Q9NWV4 160 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 SLC22A13Q9Y226 551 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 DCDC2BA2VCK2 349 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 PRH1P02810 166 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 TK1P04183 234 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 SRP19P09132 144 aaKnown RBP16.65■□□□□ 0.26
HOXC6-202ENST00000394331 MRPS11P82912 194 aaKnown RBP16.65■□□□□ 0.26
HOXC6-202ENST00000394331 COTL1Q14019 142 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 GXYLT1Q4G148 440 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 TMEM104Q8NE00 496 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 MMABQ96EY8 250 aaPredicted RBP16.65■□□□□ 0.26
HOXC6-202ENST00000394331 AMELYQ99218 206 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 SRA1Q9HD15 236 aaKnown RBP16.65■□□□□ 0.26
HOXC6-202ENST00000394331 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
HOXC6-202ENST00000394331 IGKV1D-42A0A075B6H8 117 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 C4orf47A7E2U8 309 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 CRTAPO75718 401 aaPredicted RBP16.64■□□□□ 0.25
HOXC6-202ENST00000394331 GABRA4P48169 554 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 ERVFC1-1P60608 527 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 GPR157Q5UAW9 335 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 ERGIC1Q969X5 290 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 TRBV24-1A0A075B6N3 115 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 PPP1CCP36873 323 aaKnown RBP16.64■□□□□ 0.25
HOXC6-202ENST00000394331 APOBEC1P41238 236 aaKnown RBP16.64■□□□□ 0.25
HOXC6-202ENST00000394331 FHITP49789 147 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 UNC119Q13432 240 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 SSPNQ14714 243 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 MEP1BQ16820 701 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 IAH1Q2TAA2 248 aaPredicted RBP16.64■□□□□ 0.25
HOXC6-202ENST00000394331 ZNF429Q86V71 674 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 C10orf53Q8N6V4 93 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 APCDD1LQ8NCL9 501 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 CMBLQ96DG6 245 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 KIAA1456Q9P272 454 aa16.64■□□□□ 0.25
HOXC6-202ENST00000394331 E5RGE8 158 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 PNPP00491 289 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 RENP00797 406 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 HSPB1P04792 205 aaKnown RBP16.63■□□□□ 0.25
HOXC6-202ENST00000394331 GSTP1P09211 210 aaKnown RBP16.63■□□□□ 0.25
HOXC6-202ENST00000394331 DNASE1L1P49184 302 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 ZNF74Q16587 644 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 HAGHQ16775 308 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 JSRP1Q96MG2 331 aaPredicted RBP16.63■□□□□ 0.25
HOXC6-202ENST00000394331 NIPSNAP3BQ9BS92 247 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 LRRC61Q9BV99 259 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 SMIM3Q9BZL3 60 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 NSG2Q9Y328 171 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 TMEM210A6NLX4 147 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 ISG15P05161 165 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 CAPZBP47756 277 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 GLO1Q04760 184 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 ALG10Q5BKT4 473 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.63■□□□□ 0.25
HOXC6-202ENST00000394331 ALKBH2Q6NS38 261 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 LRRC69Q6ZNQ3 347 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 ATG4DQ86TL0 474 aaPredicted RBP16.63■□□□□ 0.25
HOXC6-202ENST00000394331 TMEM156Q8N614 296 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 RARRES2Q99969 163 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 PRR13Q9NZ81 148 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 HHLA2Q9UM44 414 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 OSGIN2Q9Y236 505 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 URGCP-MRPS24S4R325 110 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 GPR137BO60478 399 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 PNLIPP16233 465 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 APLNRP35414 380 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 CTXN1P60606 82 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 PCK2Q16822 640 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 EMG1Q92979 244 aaKnown RBP16.63■□□□□ 0.25
HOXC6-202ENST00000394331 VAX2Q9UIW0 290 aa16.63■□□□□ 0.25
HOXC6-202ENST00000394331 A0A1W2PPC4 97 aa16.62■□□□□ 0.25
HOXC6-202ENST00000394331 FASLGP48023 281 aa16.62■□□□□ 0.25
HOXC6-202ENST00000394331 MMP16P51512 607 aa16.62■□□□□ 0.25
HOXC6-202ENST00000394331 FNDC7Q5VTL7 733 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms