RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 SLC17A5Q9NRA2 495 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 AKR7A2O43488 359 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TMEM267Q0VDI3 215 aaPredicted RBP12.15□□□□□ -0.46
USP49-203ENST00000394253 CLPPQ16740 277 aaPredicted RBP12.15□□□□□ -0.46
USP49-203ENST00000394253 Q6ZSR6 202 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 HMSDA8MTL9 139 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 DRD1P21728 446 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 NPBWR2P48146 333 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 PAFAH1B2P68402 229 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 BSXQ3C1V8 233 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 FOXJ3Q9UPW0 622 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 SLCO2B1O94956 709 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 SMAD2Q15796 467 aaKnown RBP12.15□□□□□ -0.46
USP49-203ENST00000394253 GLDNQ6ZMI3 551 aaPredicted RBP12.15□□□□□ -0.46
USP49-203ENST00000394253 FADS6Q8N9I5 356 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 SFRP2Q96HF1 295 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 TIMM10BQ9Y5J6 103 aa12.15□□□□□ -0.46
USP49-203ENST00000394253 A0A0A6YYC8 382 aaPredicted RBP12.15□□□□□ -0.47
USP49-203ENST00000394253 I3L1I5 382 aaPredicted RBP12.15□□□□□ -0.47
USP49-203ENST00000394253 M0R296 226 aa12.15□□□□□ -0.47
USP49-203ENST00000394253 CST7O76096 145 aa12.15□□□□□ -0.47
USP49-203ENST00000394253 PRLHRP49683 370 aa12.15□□□□□ -0.47
USP49-203ENST00000394253 RPL27P61353 136 aaKnown RBP12.15□□□□□ -0.47
USP49-203ENST00000394253 TIAL1Q01085 375 aaKnown RBP eCLIP12.15□□□□□ -0.47
USP49-203ENST00000394253 PRTGQ2VWP7 1150 aa12.15□□□□□ -0.47
USP49-203ENST00000394253 MISP3Q96FF7 219 aa12.15□□□□□ -0.47
USP49-203ENST00000394253 RGPD5Q99666 1765 aa12.15□□□□□ -0.47
USP49-203ENST00000394253 T-ENOLP0DO92 83 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 CYBAP13498 195 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 HLA-GP17693 338 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 IVDP26440 423 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 COL8A1P27658 744 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 OPRM1P35372 400 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TEX30Q5JUR7 227 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 SPNS3Q6ZMD2 512 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TMEM229BQ8NBD8 167 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 RAG2P55895 527 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 SLC38A11Q08AI6 406 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 SYPL1Q16563 259 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 ZNF260Q3ZCT1 412 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 PABPC1L2AQ5JQF8 200 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 UBE2L6O14933 153 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 ZNF502Q8TBZ5 544 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TMPRSS13Q9BYE2 586 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 CHST6Q9GZX3 395 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 RGPD2P0DJD1 1756 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 FOXA1P55317 472 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 SPATA45Q537H7 98 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 C1orf140Q5VVS0 124 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TMEM140Q9NV12 185 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 C7orf72A4D263 438 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 M0R135 149 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 CRYBA1P05813 215 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 CA3P07451 260 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 NAT2P11245 290 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 CST5P28325 142 aaPredicted RBP12.14□□□□□ -0.47
USP49-203ENST00000394253 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 RPEQ96AT9 228 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 ZNF799Q96GE5 643 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 NPTNQ9Y639 398 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 COMPP49747 757 aaPredicted RBP12.14□□□□□ -0.47
USP49-203ENST00000394253 CLEC14AQ86T13 490 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 ADAMTS17Q8TE56 1095 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 OR2W1Q9Y3N9 320 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 OPN1LWP04000 364 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 CSN3P07498 182 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 FPR2P25090 351 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 HLA-DRB3P79483 266 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TMEM65Q6PI78 240 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 TMEM255BQ8WV15 326 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 PMCHL2Q9BQD1 86 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 AJAP1Q9UKB5 411 aaPredicted RBP12.14□□□□□ -0.47
USP49-203ENST00000394253 Q9Y3F1 56 aa12.14□□□□□ -0.47
USP49-203ENST00000394253 SCN10AQ9Y5Y9 1956 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 CFHP08603 1231 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 RSRP1Q9BUV0 290 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 LAMB2P55268 1798 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 SLC17A3O00476 420 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 RBFOX2O43251 390 aaKnown RBP eCLIP12.13□□□□□ -0.47
USP49-203ENST00000394253 GHRHP01286 108 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 GLI4P10075 376 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 UBE2V2Q15819 145 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 ZNF77Q15935 545 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 SAMD13Q5VXD3 122 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 SPICQ8N5J4 248 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 PXDNQ92626 1479 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 A0A0G2JLL6 359 aaPredicted RBP12.13□□□□□ -0.47
USP49-203ENST00000394253 SDCBPO00560 298 aaPredicted RBP12.13□□□□□ -0.47
USP49-203ENST00000394253 CD3DP04234 171 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 VWA2Q5GFL6 755 aa12.13□□□□□ -0.47
USP49-203ENST00000394253 PARS2Q7L3T8 475 aaKnown RBP12.13□□□□□ -0.47
USP49-203ENST00000394253 PRRT2Q7Z6L0 340 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms