RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SRRM5B3KS81 715 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 J3QLI3 93 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 DVL1O14640 695 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 CASQ2O14958 399 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 MPZL2O60487 215 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 MTRF1O75570 445 aaKnown RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 INMTO95050 263 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 FSTL3O95633 263 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 PLATP00750 562 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 IFNA2P01563 188 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGHA1P01876 353 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 HTR1AP08908 422 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGHV4-38-2P0DP08 117 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ATP6V1B1P15313 513 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 HAAOP46952 286 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 CEBPDP49716 269 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 GNG3P63215 75 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRB3Q04118 309 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 UBE2V2Q15819 145 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 FAM76BQ5HYJ3 339 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 KLF17Q5JT82 389 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 CLVS2Q5SYC1 327 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ZBTB37Q5TC79 503 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 TMEM42Q69YG0 159 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 LAIR2Q6ISS4 152 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 C1QL2Q7Z5L3 287 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ANGPTL5Q86XS5 388 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 DHRSXQ8N5I4 330 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 PACRGLQ8N7B6 248 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR51A4Q8NGJ6 313 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ST8SIA4Q92187 359 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 DACT3Q96B18 629 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ADAT3Q96EY9 351 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 SLC6A7Q99884 636 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 NUDT16L1Q9BRJ7 211 aaKnown RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 RNPEPL1Q9HAU8 725 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ABCB9Q9NP78 766 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 ERVK-18Q9QC07 812 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 RPL36Q9Y3U8 105 aaKnown RBP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 AUP1Q9Y679 476 aa6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGKV1-27A0A075B6S5 117 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 PPIAL4CA0A0B4J2A2 164 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 PQLC2LA1A4F0 135 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR5B21A6NL26 309 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR4C45A6NMZ5 311 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 RNF212BA8MTL3 300 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 FADS2O95864 444 aaKnown RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 FSHBP01225 129 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 SFTPBP07988 381 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 UBCP0CG48 685 aaKnown RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 LIMS3P0CW19 117 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 LIMS4P0CW20 117 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 MUC1P15941 1255 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 EPHA1P21709 976 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 GLRA1P23415 457 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 CAPGP40121 348 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 GABRA2P47869 451 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 ETV1P50549 477 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 GTF2A1P52655 376 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 DLX1P56177 255 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 ACTA2P62736 377 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 ACTG2P63267 376 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 SLC34A1Q06495 639 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 PAX8Q06710 450 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 RAB40BQ12829 278 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 ALKBH1Q13686 389 aaKnown RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 GALEQ14376 348 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 KCNJ8Q15842 424 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 MICBQ29980 383 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 KRTAP24-1Q3LI83 254 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 ARMCX4Q5H9R4 360 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR2G6Q5TZ20 316 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 TTC23Q5W5X9 447 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 STUMQ69YW2 141 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 XAF1Q6GPH4 301 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 Q6ZSR3 168 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 KRT74Q7RTS7 529 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 RNF144BQ7Z419 303 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 CALHM1Q8IU99 346 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 BCL6BQ8N143 479 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR5A2Q8NGI9 324 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 OR10Z1Q8NGY1 313 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 RAB40AQ8WXH6 277 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 AQP3Q92482 292 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 FGGYQ96C11 551 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 GAFA1Q96PS6 74 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 PDCD1LG2Q9BQ51 273 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 MRI1Q9BV20 369 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 ELL3Q9HB65 397 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 NLKQ9UBE8 527 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 DNAJB11Q9UBS4 358 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 CLEC2DQ9UHP7 191 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 POLR3KQ9Y2Y1 108 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 PCDHGB1Q9Y5G3 927 aa6.36□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGKV1D-17A0A075B6S4 117 aa6.35□□□□□ -1.39
HMGB3P1-201ENST00000393368 TRAV40A0A0B4J280 105 aa6.35□□□□□ -1.39
HMGB3P1-201ENST00000393368 IGKV1-9A0A0C4DH69 117 aa6.35□□□□□ -1.39
HMGB3P1-201ENST00000393368 KIR2DS1A0A191URI9 304 aa6.35□□□□□ -1.39
HMGB3P1-201ENST00000393368 MDFIC2A0A1B0GVS7 189 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms