RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZNF100Q8IYN0 542 aa9.34□□□□□ -0.91
CALD1-203ENST00000393118 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
CALD1-203ENST00000393118 GFI1Q99684 422 aa9.34□□□□□ -0.91
CALD1-203ENST00000393118 RAB33BQ9H082 229 aa9.34□□□□□ -0.91
CALD1-203ENST00000393118 ZNF230Q9UIE0 474 aaPredicted RBP9.34□□□□□ -0.91
CALD1-203ENST00000393118 A0A0A6YYH2 397 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 A6NJ64 397 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 DHHO43323 396 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 ABHD16AO95870 558 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 TAS2R31P59538 309 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.92
CALD1-203ENST00000393118 TMEM229BQ8NBD8 167 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 APCDD1LQ8NCL9 501 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 OR2AE1Q8NHA4 323 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 OIT3Q8WWZ8 545 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 CLCC1Q96S66 551 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 TLNRD1Q9H1K6 362 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 RHOFQ9HBH0 211 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 B4GALT7Q9UBV7 327 aa9.34□□□□□ -0.92
CALD1-203ENST00000393118 TTC28Q96AY4 2481 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 CHD9Q3L8U1 2897 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 A0A1W2PPC1 479 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 AP4M1O00189 453 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 TMEM127O75204 238 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 FABP4P15090 132 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 PLP2Q04941 152 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 TGIF1Q15583 401 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 FNDC7Q5VTL7 733 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 ZNF813Q6ZN06 617 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 ZNF519Q8TB69 540 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 CALHM2Q9HA72 323 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 OPN4Q9UHM6 478 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 MRPL33O75394 65 aaKnown RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 CCL3P10147 92 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 PPP1R1AQ13522 171 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 DEGS2Q6QHC5 323 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 MEX3BQ6ZN04 569 aaKnown RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 SGPP2Q8IWX5 399 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 HPSE2Q8WWQ2 592 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 ZNF845Q96IR2 970 aaPredicted RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 ARHGAP5-AS1Q96IT6 56 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 TRBV5-7A0A0A0MS05 114 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 A0A1W2PP11 408 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 FAM166BA8MTA8 275 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 ZNF354AO60765 605 aaPredicted RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 WISP1O95388 367 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 BPNT1O95861 308 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 RPS2P15880 293 aaKnown RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 ZNF25P17030 456 aaPredicted RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 ALDH3B1P43353 468 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 CYCSP99999 105 aaKnown RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 PLEKHN1Q494U1 663 aaPredicted RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 DCAF12L2Q5VW00 463 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 BHLHE23Q8NDY6 225 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 RNF133Q8WVZ7 376 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 NICN1Q9BSH3 213 aa9.33□□□□□ -0.92
CALD1-203ENST00000393118 NUP210Q8TEM1 1887 aaPredicted RBP9.33□□□□□ -0.92
CALD1-203ENST00000393118 A0A1B0GTQ1 180 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 OR2M5A3KFT3 312 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 TTRP02766 147 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 CYB561P49447 251 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 ZP1P60852 638 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 WIPI1Q5MNZ9 446 aaPredicted RBP9.32□□□□□ -0.92
CALD1-203ENST00000393118 P4HA3Q7Z4N8 544 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 LIPHQ8WWY8 451 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 THOC3Q96J01 351 aaKnown RBP9.32□□□□□ -0.92
CALD1-203ENST00000393118 PRR13Q9NZ81 148 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 A0A0C4DFX4 3053 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 PLSCR5A0PG75 271 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 SOCS1O15524 211 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 OR2F2O95006 317 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 OR2C1O95371 312 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 PET100P0DJ07 73 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 OR2F1Q13607 317 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 PDCD1Q15116 288 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 PLPPR5Q32ZL2 321 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 UQCC3Q6UW78 93 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 ACOT7LQ6ZUV0 252 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 SPICQ8N5J4 248 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 EXD3Q8N9H8 876 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 MOB1AQ9H8S9 216 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 TINAGQ9UJW2 476 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 PRUNE2Q8WUY3 3088 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 A0A096LPE4 126 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 A0A1W2PPZ6 126 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 HSPA12AO43301 675 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 BCL2L11O43521 198 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 CLPSP04118 112 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 GP1BAP07359 652 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 EDN3P14138 238 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 ROM1Q03395 351 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 ATPAF1Q5TC12 328 aaPredicted RBP9.32□□□□□ -0.92
CALD1-203ENST00000393118 ZNF574Q6ZN55 896 aaPredicted RBP9.32□□□□□ -0.92
CALD1-203ENST00000393118 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 METTL9Q9H1A3 318 aa9.32□□□□□ -0.92
CALD1-203ENST00000393118 SLC17A5Q9NRA2 495 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms