RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ALDOCP09972 364 aaKnown RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 GALP22466 123 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 SPSB1Q96BD6 273 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 TAAR3PQ9P1P4 343 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 MBLAC1A4D2B0 266 aaPredicted RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 RBP4P02753 201 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 HIST1H1CP16403 213 aaKnown RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 ACAA2P42765 397 aaKnown RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 MLF2Q15773 248 aaPredicted RBP13.32□□□□□ -0.28
CCDC50-201ENST00000392455 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 CHST8Q9H2A9 424 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 ANKRD10Q9NXR5 420 aa13.32□□□□□ -0.28
CCDC50-201ENST00000392455 HES3Q5TGS1 186 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 OR2G6Q5TZ20 316 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 TBC1D26Q86UD7 250 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM229BQ8NBD8 167 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 PRELID3AQ96N28 172 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 SH3BGRL3Q9H299 93 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 SLAMF8Q9P0V8 285 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 RAG2P55895 527 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 BTLAQ7Z6A9 289 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 HDAC8Q9BY41 377 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 SMDT1Q9H4I9 107 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 A0A1B0GWA3 101 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 CLDN12P56749 244 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 PIGTQ969N2 578 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 NAGKQ9UJ70 344 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 CCL26Q9Y258 94 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 TEAD1P28347 426 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 WSB1Q9Y6I7 421 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 ATRXP46100 2492 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 CCSO14618 274 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 MIDNQ504T8 468 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 KHDC3LQ587J8 217 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM81Q6P7N7 255 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 ASCL5Q7RTU5 278 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 NUFIP2Q7Z417 695 aaKnown RBP13.31□□□□□ -0.28
CCDC50-201ENST00000392455 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 EMCNQ9ULC0 261 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 NANOGP1Q8N7R0 232 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 OR10D4PQ8NGN7 298 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 PPP1R1CQ8WVI7 109 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 OXGR1Q96P68 337 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 DPPA3Q6W0C5 159 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 OR2T10Q8NGZ9 312 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 MVB12AQ96EY5 273 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 CDCA4Q9BXL8 241 aa13.31□□□□□ -0.28
CCDC50-201ENST00000392455 RGS7BPQ6MZT1 257 aaPredicted RBP13.3□□□□□ -0.28
CCDC50-201ENST00000392455 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 OR2D3Q8NGH3 330 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 SLC52A3Q9NQ40 469 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 C5orf49A4QMS7 147 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 GPX5O75715 221 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 CST5P28325 142 aaPredicted RBP13.3□□□□□ -0.28
CCDC50-201ENST00000392455 B2MP61769 119 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 TMEM102Q8N9M5 508 aaPredicted RBP13.3□□□□□ -0.28
CCDC50-201ENST00000392455 SPTBN2O15020 2390 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 OR2A25A4D2G3 310 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 CDC34P49427 236 aaPredicted RBP13.3□□□□□ -0.28
CCDC50-201ENST00000392455 MYBPHQ13203 477 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 DHRS4Q9BTZ2 278 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 GABARAPL3Q9BY60 117 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 HS3ST3A1Q9Y663 406 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 ITGB4P16144 1822 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 TARM1B6A8C7 271 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 H0YIG0 161 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 PAPPA-AS1Q5QFB9 102 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 DHRS4L2Q6PKH6 230 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 C10orf126Q8N4M7 172 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 LAMB1P07942 1786 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 M0R296 226 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 P01737 135 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 PLP1P60201 277 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 PABPC1L2AQ5JQF8 200 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 ZBTB37Q5TC79 503 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 MRGPRX4Q96LA9 322 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 ZNF737O75373 536 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 GABRB1P18505 474 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 RPL29P47914 159 aaKnown RBP13.3□□□□□ -0.28
CCDC50-201ENST00000392455 NRG4Q8WWG1 115 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 SLAMF6Q96DU3 332 aa13.3□□□□□ -0.28
CCDC50-201ENST00000392455 TECRQ9NZ01 308 aaKnown RBP13.3□□□□□ -0.28
CCDC50-201ENST00000392455 PRKRAO75569 313 aaKnown RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 RNPS1Q15287 305 aaKnown RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 PTOV1Q86YD1 416 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 NUDT10Q8NFP7 164 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 GABRG3Q99928 467 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 IL36GQ9NZH8 169 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 DHCR7Q9UBM7 475 aaKnown RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 LPAR3Q9UBY5 353 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 ST3GAL6Q9Y274 331 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 DHRS7CA6NNS2 312 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 SUMO3P55854 103 aaPredicted RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 JMJD6Q6NYC1 403 aaPredicted RBP13.29□□□□□ -0.28
CCDC50-201ENST00000392455 RPEQ96AT9 228 aa13.29□□□□□ -0.28
CCDC50-201ENST00000392455 FPR2P25090 351 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms