RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 ZNF573Q86YE8 665 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 C11orf53Q8IXP5 236 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 SMIM19Q96E16 107 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 ADAT3Q96EY9 351 aaPredicted RBP13.66□□□□□ -0.22
MRPL28-202ENST00000389675 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 OR51I2Q9H344 312 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 TMEM165Q9HC07 324 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 KCNS2Q9ULS6 477 aa13.66□□□□□ -0.22
MRPL28-202ENST00000389675 YLPM1P49750 1951 aaKnown RBP13.65□□□□□ -0.22
MRPL28-202ENST00000389675 TRAV38-1A0A0B4J264 116 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 OOEPA6NGQ2 149 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 CEACAM18A8MTB9 384 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 A8MV72 311 aaPredicted RBP13.65□□□□□ -0.22
MRPL28-202ENST00000389675 FAM157AC9JC47 383 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 LALBAP00709 142 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 HAAOP46952 286 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 SLC35A2P78381 396 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 HOXA4Q00056 320 aaPredicted RBP13.65□□□□□ -0.22
MRPL28-202ENST00000389675 UBE2V2Q15819 145 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 ZNF404Q494X3 552 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 FAM76BQ5HYJ3 339 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 RBM48Q5RL73 367 aaKnown RBP13.65□□□□□ -0.22
MRPL28-202ENST00000389675 NLRC3Q7RTR2 1065 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 GCSAMQ8N6F7 178 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 NANOGP1Q8N7R0 232 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 ZFP41Q8N8Y5 198 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 OR10Z1Q8NGY1 313 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 OR51F2Q8NH61 342 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 ZNF671Q8TAW3 534 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 GPR148Q8TDV2 347 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 BORCS8Q96FH0 119 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 TMEM246Q9BRR3 403 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 CDCA4Q9BXL8 241 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 RASSF4Q9H2L5 321 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 PATZ1Q9HBE1 687 aaKnown RBP13.65□□□□□ -0.22
MRPL28-202ENST00000389675 NEK6Q9HC98 313 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 PAK1IP1Q9NWT1 392 aaPredicted RBP13.65□□□□□ -0.22
MRPL28-202ENST00000389675 DNAJB11Q9UBS4 358 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 MIOXQ9UGB7 285 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 PCDHGB5Q9Y5G0 923 aa13.65□□□□□ -0.22
MRPL28-202ENST00000389675 IGHV3OR15-7A0A075B7D8 119 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 PNMA8CA0A1B0GUJ8 204 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 PQLC2LA1A4F0 135 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 OGG1O15527 345 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 AKR7A2O43488 359 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 FSTL3O95633 263 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 CD2P06729 351 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 MSMBP08118 114 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 EGR1P18146 543 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 PRKACBP22694 351 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 CRHBPP24387 322 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 SOX2P48431 317 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 FUT6P51993 359 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 MICBQ29980 383 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 RNLSQ5VYX0 342 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 DCDC5Q6ZRR9 648 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 UTS2BQ765I0 119 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 GLCCI1Q86VQ1 547 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 OR13C9Q8NGT0 318 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 AQP3Q92482 292 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 SGCDQ92629 289 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 C1orf159Q96HA4 380 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 DUSP21Q9H596 190 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 ZNF281Q9Y2X9 895 aa13.64□□□□□ -0.23
MRPL28-202ENST00000389675 SIRT4Q9Y6E7 314 aaPredicted RBP13.64□□□□□ -0.23
MRPL28-202ENST00000389675 SRRM5B3KS81 715 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 J3QT63 122 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 DENRO43583 198 aaKnown RBP13.63□□□□□ -0.23
MRPL28-202ENST00000389675 LHBP01229 141 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 MT-ND2P03891 347 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 ATF1P18846 271 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 CFHR2P36980 270 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 ATP1B3P54709 279 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 MED22Q15528 200 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 ESCO2Q56NI9 601 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 ZNF485Q8NCK3 441 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 OR8B3Q8NGG8 313 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 OR5D14Q8NGL3 314 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 RPS4Y2Q8TD47 263 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 GHSRQ92847 366 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 NEIL1Q96FI4 390 aaPredicted RBP13.63□□□□□ -0.23
MRPL28-202ENST00000389675 OR8B2Q96RD0 313 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 ZCCHC4Q9H5U6 513 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 POLDIP2Q9Y2S7 368 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 MALRD1Q5VYJ5 2156 aa13.63□□□□□ -0.23
MRPL28-202ENST00000389675 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 ADAM20O43506 726 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 NDUFA2O43678 99 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 PLPP2O43688 288 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 FOXH1O75593 365 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 RHBDL1O75783 438 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 PLATP00750 562 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 GYPAP02724 150 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 MUC1P15941 1255 aaPredicted RBP13.62□□□□□ -0.23
MRPL28-202ENST00000389675 CELP19835 753 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 PCMT1P22061 227 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 GLRA1P23415 457 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 CPT2P23786 658 aa13.62□□□□□ -0.23
MRPL28-202ENST00000389675 AZGP1P25311 298 aaKnown RBP13.62□□□□□ -0.23
MRPL28-202ENST00000389675 RBP2P50120 134 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms