RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 ARFRP1Q13795 201 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 RPUSD3Q6P087 351 aaKnown RBP21.76■■□□□ 1.07
SHOX2-201ENST00000389589 RTN4RL2Q86UN3 420 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 OR5L1Q8NGL2 311 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 CCDC107Q8WV48 283 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 MS4A3Q96HJ5 214 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 ZNF75AQ96N20 296 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 PECRQ9BY49 303 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 PTTG3PQ9NZH4 202 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 EIF3KQ9UBQ5 218 aaKnown RBP21.76■■□□□ 1.07
SHOX2-201ENST00000389589 ZNF69Q9UC07 566 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 ZNF850A8MQ14 1090 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 ZNHIT1O43257 154 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 SPRY1O43609 319 aaPredicted RBP21.76■■□□□ 1.07
SHOX2-201ENST00000389589 CST4P01036 141 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 VSIG10L2P0DP72 767 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 HOXB1P14653 301 aaPredicted RBP21.76■■□□□ 1.07
SHOX2-201ENST00000389589 UBE2NP61088 152 aaKnown RBP21.76■■□□□ 1.07
SHOX2-201ENST00000389589 FOXC1Q12948 553 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 ACTBL2Q562R1 376 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 CNEP1R1Q8N9A8 125 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 SLC30A7Q8NEW0 376 aa21.76■■□□□ 1.07
SHOX2-201ENST00000389589 UBE2QL1A1L167 161 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 ANGPTL7O43827 346 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 RAD51DO75771 328 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 KIR2DL2P43627 348 aaPredicted RBP21.75■■□□□ 1.07
SHOX2-201ENST00000389589 GTF3C1Q12789 2109 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 PDZK1IP1Q13113 114 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 NSUN5P2Q63ZY6 315 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 OR52W1Q6IF63 320 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 SEZ6L2Q6UXD5 910 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 SPICQ8N5J4 248 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 ST8SIA4Q92187 359 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 MRPS24Q96EL2 167 aaKnown RBP21.75■■□□□ 1.07
SHOX2-201ENST00000389589 HYLS1Q96M11 299 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 PAPOLGQ9BWT3 736 aaKnown RBP21.75■■□□□ 1.07
SHOX2-201ENST00000389589 J3QW42 95 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 FABP7O15540 132 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 NGFP01138 241 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 TBC1D28Q2M2D7 210 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 RANBP3Q9H6Z4 567 aaPredicted RBP21.75■■□□□ 1.07
SHOX2-201ENST00000389589 MYOZ1Q9NP98 299 aaPredicted RBP21.75■■□□□ 1.07
SHOX2-201ENST00000389589 NPTNQ9Y639 398 aa21.75■■□□□ 1.07
SHOX2-201ENST00000389589 ZFHX4Q86UP3 3567 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 TMEM82A0PJX8 343 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 HRH1P35367 487 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 CXADRP78310 365 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 SCGB2B2Q4G0G5 96 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 CD163Q86VB7 1156 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 ZSCAN4Q8NAM6 433 aaPredicted RBP21.74■■□□□ 1.07
SHOX2-201ENST00000389589 OR4K15Q8NH41 348 aa21.74■■□□□ 1.07
SHOX2-201ENST00000389589 AKR7A2O43488 359 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 PLATP00750 562 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 CRYABP02511 175 aaKnown RBP21.73■■□□□ 1.07
SHOX2-201ENST00000389589 IFNA6P05013 189 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 WNT5AP41221 380 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 PRDX4Q13162 271 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 HLXQ14774 488 aaPredicted RBP21.73■■□□□ 1.07
SHOX2-201ENST00000389589 CDK10Q15131 360 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 NKPD1Q17RQ9 610 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 RBMXL3Q8N7X1 1067 aaKnown RBP21.73■■□□□ 1.07
SHOX2-201ENST00000389589 WBP1Q96G27 269 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 BOD1Q96IK1 185 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 ZNF436Q9C0F3 470 aaPredicted RBP21.73■■□□□ 1.07
SHOX2-201ENST00000389589 GPR160Q9UJ42 338 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 SSUH2Q9Y2M2 353 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 LOC400499M0QZD8 3231 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 PDGFAP04085 211 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 MRPL49Q13405 166 aaKnown RBP21.73■■□□□ 1.07
SHOX2-201ENST00000389589 GABRA6Q16445 453 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 ZNF585AQ6P3V2 769 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 ZDHHC23Q8IYP9 409 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 SNAPC3Q92966 411 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 POFUT1Q9H488 388 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 AKAP13Q12802 2813 aa21.73■■□□□ 1.07
SHOX2-201ENST00000389589 FAM172BPA6NC97 362 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 MKRN2OSH3BPM6 223 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 CSN2P05814 226 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 ZNF14P17017 642 aaPredicted RBP21.72■■□□□ 1.07
SHOX2-201ENST00000389589 GABRR1P24046 479 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 INO80CQ6PI98 192 aaPredicted RBP21.72■■□□□ 1.07
SHOX2-201ENST00000389589 C1orf162Q8NEQ5 155 aaPredicted RBP21.72■■□□□ 1.07
SHOX2-201ENST00000389589 OR13C8Q8NGS7 320 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 ZFAND1Q8TCF1 268 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 FBXW5Q969U6 566 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 PLEKHJ1Q9NW61 149 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 HSF4Q9ULV5 492 aa21.72■■□□□ 1.07
SHOX2-201ENST00000389589 PQLC2LA1A4F0 135 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 SMLR1H3BR10 107 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 LYZL6O75951 148 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 COX5AP20674 150 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 CEACAM21Q3KPI0 293 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 HOGA1Q86XE5 327 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 OR51F2Q8NH61 342 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 POM121Q96HA1 1249 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 PLSCR4Q9NRQ2 329 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 CD300LBA8K4G0 201 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 VAX1Q5SQQ9 334 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 VWA1Q6PCB0 445 aa21.71■■□□□ 1.07
SHOX2-201ENST00000389589 OSR2Q8N2R0 312 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms