RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CSNK2A2P19784 350 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 IL10P22301 178 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PAX6P26367 422 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 TEAD1P28347 426 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PEBP1P30086 187 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PRSS3P35030 304 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ATP6V1E1P36543 226 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 MYCNOSP40205 109 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NAA10P41227 235 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 HTR2BP41595 481 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 GPR4P46093 362 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 HINT1P49773 126 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 XKP51811 444 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SLC18A1P54219 525 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF121P58317 390 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 RPL26P61254 145 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 GRB2P62993 217 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 HOXC5Q00444 222 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ADIGQ0VDE8 80 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ITIH4Q14624 930 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SURF2Q15527 256 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NADK2Q4G0N4 442 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CT45A1Q5HYN5 189 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PPM1LQ5SGD2 360 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 TIMM23BQ5SRD1 257 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 TPTE2P1Q5T6R2 138 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 KDM4DQ6B0I6 523 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NIPAL1Q6NVV3 410 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ZYG11AQ6WRX3 759 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 EFL1Q7Z2Z2 1120 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 RBM45Q8IUH3 476 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CMTM1Q8IZ96 169 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 FAM58AQ8N1B3 248 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 OR2M7Q8NG81 312 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 OR5H2Q8NGV7 314 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CT45A3Q8NHU0 189 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NUBPLQ8TB37 319 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CCDC110Q8TBZ0 833 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SFXN5Q8TD22 340 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SPACA4Q8TDM5 124 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 GPR151Q8TDV0 419 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ORAOV1Q8WV07 137 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 MRPL48Q96GC5 212 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 COQ2Q96H96 371 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CAPZA3Q96KX2 299 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 UBE2E2Q96LR5 201 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 Q96MT0 163 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 RDH12Q96NR8 316 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 UQCC2Q9BRT2 126 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM43Q9BTV4 400 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 KRTAP2-4Q9BYR9 128 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 KRTAP2-1Q9BYU5 128 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ILKAPQ9H0C8 392 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 C1orf21Q9H246 121 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NEUROG2Q9H2A3 272 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 MFSD1Q9H3U5 465 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SLC35D1Q9NTN3 355 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 OR5V1Q9UGF6 321 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SLC23A2Q9UGH3 650 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 RPL26L1Q9UNX3 145 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 KNSTRNQ9Y448 316 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 FADS3Q9Y5Q0 445 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ENPP4Q9Y6X5 453 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NCOR2Q9Y618 2525 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 NUMA1Q14980 2115 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SETD1AO15047 1707 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 TRPM3Q9HCF6 1732 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ATP8B3O60423 1300 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 BAZ2BQ9UIF8 2168 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PCDH15Q96QU1 1955 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 IGSF10Q6WRI0 2623 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 TNCP24821 2201 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ALPK2Q86TB3 2170 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 TRBV24-1A0A075B6N3 115 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 IGHV6-1A0A0B4J1U7 121 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 TRBV6-5A0A0K0K1A5 114 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 A0A1W2PPE3 182 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 VPS37CA5D8V6 355 aaPredicted RBP-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 PCP4L1A6NKN8 68 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 SNTNA6NMZ2 147 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF99A8MXY4 864 aaPredicted RBP-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 C9JQL5 133 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 F5H5P2 479 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 AP3B1O00203 1094 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 GABRPO00591 440 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 AIM2O14862 343 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 PRPSAP2O60256 369 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 CACNG3O60359 315 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 SNNO75324 88 aaPredicted RBP-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 TSPAN12O95859 305 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 HPRT1P00492 218 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 IQCF3P0C7M6 154 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 OR12D1P0DN82 309 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 ALOX5APP20292 161 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 BCKDHBP21953 392 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 USF1P22415 310 aaPredicted RBP-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 PBLDP30039 288 aaPredicted RBP-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 PFN2P35080 140 aa-0.2□□□□□ -2.44
SNORD28-201ENST00000384706 MDH1P40925 334 aaKnown RBP-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms