RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TLE1Q04724 770 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 ICAM4Q14773 271 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 FBXO42Q6P3S6 717 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 ERASQ7Z444 233 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 OR4D6Q8NGJ1 314 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 OR14L1PQ8NHC6 308 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 CDH20Q9HBT6 801 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 MKKSQ9NPJ1 570 aaPredicted RBP13.31□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF107Q9UII5 783 aaPredicted RBP13.31□□□□□ -0.28
VLDLR-202ENST00000382099 FAM230AA0A1W2PPH8 454 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 GRXCR1A8MXD5 290 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 C17orf105B2RV13 164 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 MEP1BQ16820 701 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 IGSF21Q96ID5 467 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 OR5B12Q96R08 314 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 AMELYQ99218 206 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 PPIL1Q9Y3C6 166 aa13.31□□□□□ -0.28
VLDLR-202ENST00000382099 FCRL6Q6DN72 434 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SLC24A4Q8NFF2 622 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 OR52E1Q8NGJ3 308 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 VN1R17PQ8TDU5 208 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 MRPL24Q96A35 216 aaKnown RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 REEP6Q96HR9 211 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SCGB3A2Q96PL1 93 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 PCGF1Q9BSM1 259 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 PCED1AQ9H1Q7 454 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF552Q9H707 407 aaPredicted RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 CNTD2Q9H8S5 307 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 C1orf123Q9NWV4 160 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SLC7A11Q9UPY5 501 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SLC33A1O00400 549 aaPredicted RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SMPD2O60906 423 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 RPL19P84098 196 aaKnown RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 CDK3Q00526 305 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF684Q5T5D7 378 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 LINC01590Q5TEZ4 76 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 OR8G2PQ6IF36 304 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 KLHDC8AQ8IYD2 350 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 NOXO1Q8NFA2 376 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 MRGPRDQ8TDS7 321 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 DYRK2Q92630 601 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 TOMM40LQ969M1 308 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 TXN2Q99757 166 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 EHFQ9NZC4 300 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 ATG2BQ96BY7 2078 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 K7N7A8 449 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 TIMP1P01033 207 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 DBIP07108 87 aaKnown RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 ACAA2P42765 397 aaKnown RBP13.3□□□□□ -0.28
VLDLR-202ENST00000382099 PRLHRP49683 370 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 MLF1P58340 268 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 TMEM183BQ1AE95 376 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 LDLRAD2Q5SZI1 272 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 PHF19Q5T6S3 580 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 DPPA3Q6W0C5 159 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 STPG4Q8N801 248 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 IFI44Q8TCB0 444 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 RPS4Y2Q8TD47 263 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 ADOQ96SZ5 270 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 KIAA1456Q9P272 454 aa13.3□□□□□ -0.28
VLDLR-202ENST00000382099 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 E5RGE8 158 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 OR5T1Q8NG75 326 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 MS4A6EQ96DS6 147 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 NSG2Q9Y328 171 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 MDC1Q14676 2089 aaKnown RBP13.29□□□□□ -0.28
VLDLR-202ENST00000382099 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 CDC14CA4D256 554 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 WIPF3A6NGB9 483 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 B4DEV8 164 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF92Q03936 586 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 DUSP8Q13202 625 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 CPEB2Q7Z5Q1 589 aaKnown RBP13.29□□□□□ -0.28
VLDLR-202ENST00000382099 MARCH3Q86UD3 253 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 KMT5CQ86Y97 462 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 ZNF619Q8N2I2 560 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 OR5L2Q8NGL0 311 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 CORO2AQ92828 525 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 ENTPD2Q9Y5L3 495 aa13.29□□□□□ -0.28
VLDLR-202ENST00000382099 A0A0A6YYD5 115 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 LYPD3O95274 346 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ABHD16AO95870 558 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 TDGF1P13385 188 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 FOLR1P15328 257 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 GPR18Q14330 331 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 VAMP3Q15836 100 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 SP6Q3SY56 376 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 UNQ5815/PRO19632Q6UWF5 114 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.28□□□□□ -0.28
VLDLR-202ENST00000382099 GRINAQ7Z429 371 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 PLD4Q96BZ4 506 aa13.28□□□□□ -0.28
VLDLR-202ENST00000382099 ACY3Q96HD9 319 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms