RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 OR5D13Q8NGL4 314 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 HPSE2Q8WWQ2 592 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
RPAIN-202ENST00000381208 LYZL4Q96KX0 146 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 CITED1Q99966 193 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 CADM1Q9BY67 442 aaKnown RBP10.67□□□□□ -0.7
RPAIN-202ENST00000381208 WDR13Q9H1Z4 485 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 FAM206AQ9NX38 181 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 TVP23BQ9NYZ1 205 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 H2AFY2Q9P0M6 372 aaPredicted RBP10.67□□□□□ -0.7
RPAIN-202ENST00000381208 NUFIP1Q9UHK0 495 aaKnown RBP10.67□□□□□ -0.7
RPAIN-202ENST00000381208 ENOPH1Q9UHY7 261 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 ENPP5Q9UJA9 477 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 RNF114Q9Y508 228 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 WNK1Q9H4A3 2382 aa10.67□□□□□ -0.7
RPAIN-202ENST00000381208 A0A1W2PPH5 198 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 A0A1W2PQ09 198 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 ZNF732B4DXR9 585 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 NPFFO15130 113 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 CLPXO76031 633 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 IGHV4-59P01825 116 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 NDUFB7P17568 137 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 PRKACGP22612 351 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 DTX3Q8N9I9 347 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 ZSCAN4Q8NAM6 433 aaPredicted RBP10.66□□□□□ -0.7
RPAIN-202ENST00000381208 BBS1Q8NFJ9 593 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 OR5T2Q8NGG2 359 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 SEH1LQ96EE3 360 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 OR8B4Q96RC9 309 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 CNN2Q99439 309 aaKnown RBP10.66□□□□□ -0.7
RPAIN-202ENST00000381208 PBOV1Q9GZY1 135 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 OR51I2Q9H344 312 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 PPP1R3EQ9H7J1 279 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 SIRT7Q9NRC8 400 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 SNTG1Q9NSN8 517 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 ZNRD1Q9P1U0 126 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 VPREB3Q9UKI3 123 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.66□□□□□ -0.7
RPAIN-202ENST00000381208 POMPQ9Y244 141 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 KLHDC2Q9Y2U9 406 aa10.66□□□□□ -0.7
RPAIN-202ENST00000381208 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
RPAIN-202ENST00000381208 A0A1B0GW55 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 SLC22A31A6NKX4 558 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DHRS7CA6NNS2 312 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DHRS3O75911 302 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 IGLV3-1P01715 115 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L2P0CJ85 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L3P0CJ86 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L4P0CJ87 422 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L5P0CJ88 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L6P0CJ89 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L7P0CJ90 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 TGFBR2P37173 567 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 GABRA2P47869 451 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 GMFBP60983 142 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DGUOKQ16854 277 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 SMIM21Q3B7S5 101 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 TMEM236Q5W0B7 351 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 PLCXD3Q63HM9 321 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DHRS7BQ6IAN0 325 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-202ENST00000381208 FAHD1Q6P587 224 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4L9Q6RFH8 374 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-202ENST00000381208 ZNF573Q86YE8 665 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 PDZD9Q8IXQ8 264 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 HS3ST5Q8IZT8 346 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 Q8N7P7 452 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 OR5K1Q8NHB7 308 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 LINC01006Q8NI28 216 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 AQP3Q92482 292 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 TNFRSF14Q92956 283 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 SDSLQ96GA7 329 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 FAM234AQ9H0X4 552 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 GPR84Q9NQS5 396 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 DUX4Q9UBX2 424 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 IKZF2Q9UKS7 526 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 POLDIP2Q9Y2S7 368 aa10.65□□□□□ -0.7
RPAIN-202ENST00000381208 MEGF8Q7Z7M0 2845 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 hCG_1809904A0A1W2PP81 198 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 A0A1W2PPE2 198 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 A0A1W2PR64 198 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 A0A1W2PRV1 198 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 RNASEK-C17orf49H0YIS7 233 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 TSPAN9O75954 239 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 ATP6V1G2O95670 118 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 NRASP01111 189 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 PSG2P11465 335 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 EGR3Q06889 387 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 PTGES3Q15185 160 aaKnown RBP10.65□□□□□ -0.71
RPAIN-202ENST00000381208 MIDNQ504T8 468 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 CEP78Q5JTW2 689 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 ZNF684Q5T5D7 378 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 NXNL2Q5VZ03 156 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 ZNF322Q6U7Q0 402 aaPredicted RBP10.65□□□□□ -0.71
RPAIN-202ENST00000381208 MOB3CQ70IA8 216 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 MEPCEQ7L2J0 689 aaKnown RBP10.65□□□□□ -0.71
RPAIN-202ENST00000381208 FGFRL1Q8N441 504 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 TMEM185AQ8NFB2 350 aa10.65□□□□□ -0.71
RPAIN-202ENST00000381208 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms