RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RNF170Q96K19 258 aa13.03□□□□□ -0.32
VCX3A-201ENST00000381089 INTS14Q96SY0 518 aa13.03□□□□□ -0.32
VCX3A-201ENST00000381089 TSSK6Q9BXA6 273 aa13.03□□□□□ -0.32
VCX3A-201ENST00000381089 HEXA-AS1Q9H8Q6 139 aa13.03□□□□□ -0.32
VCX3A-201ENST00000381089 REEP1Q9H902 201 aa13.03□□□□□ -0.32
VCX3A-201ENST00000381089 BRD7Q9NPI1 651 aa13.03□□□□□ -0.32
VCX3A-201ENST00000381089 hCG_1809904A0A1W2PP81 198 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 A0A1W2PPE2 198 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 A0A1W2PR64 198 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 A0A1W2PRV1 198 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF850A8MQ14 1090 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 FBXO24O75426 580 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 CST4P01036 141 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 H2BFMP0C1H6 154 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 CAPZA1P52907 286 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 LGALS4P56470 323 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.33
VCX3A-201ENST00000381089 ZDHHC23Q8IYP9 409 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 OR9Q2Q8NGE9 314 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 PIGCQ92535 297 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 RORBQ92753 470 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 NKX3-1Q99801 234 aaPredicted RBP13.02□□□□□ -0.33
VCX3A-201ENST00000381089 ABHD6Q9BV23 337 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 NMNAT2Q9BZQ4 307 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 PPP1R3EQ9H7J1 279 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.33
VCX3A-201ENST00000381089 NOTCH3Q9UM47 2321 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 H3BNX3 289 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 PEX14O75381 377 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 E2F6O75461 281 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 CCNB2O95067 398 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
VCX3A-201ENST00000381089 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 FAM76BQ5HYJ3 339 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 PRSS45Q7RTY3 260 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 OR8D4Q8NGM9 314 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 C17orf50Q8WW18 174 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 STMN2Q93045 179 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 ARMC1Q9NVT9 282 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 DNAJB9Q9UBS3 223 aa13.01□□□□□ -0.33
VCX3A-201ENST00000381089 CLUP10909 449 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 FASP25445 335 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 GSTT1P30711 240 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 OPRL1P41146 370 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 HMGA2P52926 109 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 ATP6AP1Q15904 470 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 OXLD1Q5BKU9 147 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 ZFP1Q6P2D0 407 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 AMIGO2Q86SJ2 522 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 ZNRF1Q8ND25 227 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF671Q8TAW3 534 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 FAM81AQ8TBF8 368 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 R3HDM4Q96D70 268 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 ELL3Q9HB65 397 aaPredicted RBP13□□□□□ -0.33
VCX3A-201ENST00000381089 S100A14Q9HCY8 104 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
VCX3A-201ENST00000381089 LRP12Q9Y561 859 aa13□□□□□ -0.33
VCX3A-201ENST00000381089 GASTP01350 101 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 TFF1P04155 84 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 PSG2P11465 335 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 FCGR1AP12314 374 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 FAHP16930 419 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 GPM6AP51674 278 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 GNG3P63215 75 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 HCP5Q6MZN7 132 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 CRIP3Q6Q6R5 217 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 TMEM179BQ7Z7N9 219 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 HS3ST5Q8IZT8 346 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 AQP11Q8NBQ7 271 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 OR5K1Q8NHB7 308 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 OTULINQ96BN8 352 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 CDCA4Q9BXL8 241 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 ABCB10Q9NRK6 738 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF319Q9P2F9 582 aa12.99□□□□□ -0.33
VCX3A-201ENST00000381089 IGKV1D-17A0A075B6S4 117 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 SLC1A7O00341 560 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 SOX14O95416 240 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 LYNP07948 512 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 ACKR3P25106 362 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 DCTDP32321 178 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 BMXP51813 675 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 RPL31P62899 125 aaKnown RBP12.98□□□□□ -0.33
VCX3A-201ENST00000381089 ARSJQ5FYB0 599 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-201ENST00000381089 LINC01590Q5TEZ4 76 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 THAP5Q7Z6K1 395 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 MKXQ8IYA7 352 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 C10orf67Q8IYJ2 551 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 LYG1Q8N1E2 194 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF454Q8N9F8 522 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 OR10G2Q8NGC3 310 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 OR4Q3Q8NH05 313 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 HPSE2Q8WWQ2 592 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 ITFG2Q969R8 447 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 SDSLQ96GA7 329 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms