RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 HOGA1Q86XE5 327 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 BHLHE23Q8NDY6 225 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 OR5L1Q8NGL2 311 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 C5orf66Q9H5L9 145 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 RASL12Q9NYN1 266 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 RBM7Q9Y580 266 aaKnown RBP17.12■□□□□ 0.33
FOXC1-201ENST00000380874 K7EPK0 472 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 TOR1AO14656 332 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 IFNA2P01563 188 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 FPR2P25090 351 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 RBP2P50120 134 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 LSM6P62312 80 aaKnown RBP17.12■□□□□ 0.33
FOXC1-201ENST00000380874 FAM71E2Q8N5Q1 922 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 OR13G1Q8NGZ3 307 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 HIST1H2AAQ96QV6 131 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 PAPOLGQ9BWT3 736 aaKnown RBP17.12■□□□□ 0.33
FOXC1-201ENST00000380874 WIPF3A6NGB9 483 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 CEBPGP53567 150 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 RAC1P63000 192 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 OR52H1Q8NGJ2 320 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 OR2Y1Q8NGV0 311 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 RNF141Q8WVD5 230 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 CNTNAP3BQ96NU0 1288 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 C1orf123Q9NWV4 160 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 GLS2Q9UI32 602 aa17.12■□□□□ 0.33
FOXC1-201ENST00000380874 IGHV1-45A0A0A0MS14 117 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 FAM166BA8MTA8 275 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 PMS2CLQ68D20 193 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 CLEC9AQ6UXN8 241 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 HSD17B13Q7Z5P4 300 aaPredicted RBP17.11■□□□□ 0.33
FOXC1-201ENST00000380874 FBXL14Q8N1E6 418 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.11■□□□□ 0.33
FOXC1-201ENST00000380874 SEMA5BQ9P283 1151 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 FBXO9Q9UK97 447 aaPredicted RBP17.11■□□□□ 0.33
FOXC1-201ENST00000380874 MRPL33O75394 65 aaKnown RBP17.11■□□□□ 0.33
FOXC1-201ENST00000380874 NRASP01111 189 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 ANOS1P23352 680 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 CYB561P49447 251 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 FAM76BQ5HYJ3 339 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 EMG1Q92979 244 aaKnown RBP17.11■□□□□ 0.33
FOXC1-201ENST00000380874 WNT2BQ93097 391 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 MARVELD3Q96A59 401 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 SAV1Q9H4B6 383 aaPredicted RBP17.11■□□□□ 0.33
FOXC1-201ENST00000380874 DIRAS3O95661 229 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 ZNF728P0DKX0 622 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 PLXDC2Q6UX71 529 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 OR5AP2Q8NGF4 316 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 OR1F12Q8NHA8 337 aa17.11■□□□□ 0.33
FOXC1-201ENST00000380874 ARPC4-TTLL3A0A0A6YYG9 625 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 OR6C65A6NJZ3 312 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 TSPO2Q5TGU0 170 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 ABHD17BQ5VST6 288 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 IQCF2Q8IXL9 164 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 PIGMQ9H3S5 423 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 HPP00738 406 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 CLDN15P56746 228 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 PPIAP62937 165 aaKnown RBP17.1■□□□□ 0.33
FOXC1-201ENST00000380874 MALLQ13021 153 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 SLC22A25Q6T423 547 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 ZNF845Q96IR2 970 aaPredicted RBP17.1■□□□□ 0.33
FOXC1-201ENST00000380874 C2orf50Q96LR7 162 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 PARPBPQ9NWS1 579 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 OR5AC2Q9NZP5 309 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 NOSIPQ9Y314 301 aaKnown RBP17.1■□□□□ 0.33
FOXC1-201ENST00000380874 RNF222A6NCQ9 220 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 C10orf142B7Z368 130 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 E9PLN8 166 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 H7C2Y5 167 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 BET1O15155 118 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 CCL2P13500 99 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 PDSS1Q5T2R2 415 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 TCEAL6Q6IPX3 200 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 TCEAL3Q969E4 200 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 THOC3Q96J01 351 aaKnown RBP17.1■□□□□ 0.33
FOXC1-201ENST00000380874 DMRTA2Q96SC8 542 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 GPR132Q9UNW8 380 aa17.1■□□□□ 0.33
FOXC1-201ENST00000380874 SERPINE3A8MV23 424 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 CD8AP01732 235 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 ANKRD55Q3KP44 614 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 MRPL14Q6P1L8 145 aaKnown RBP17.09■□□□□ 0.33
FOXC1-201ENST00000380874 ZNF565Q8N9K5 539 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 OR10D3Q8NH80 312 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 FOXB1Q99853 325 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 EDEM2Q9BV94 578 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 SRXN1Q9BYN0 137 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 SLC2A8Q9NY64 477 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 XRCC2O43543 280 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 MELTFP08582 738 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 COX6A1P12074 109 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 GSK3AP49840 483 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 PIGPP57054 158 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 ALKBH2Q6NS38 261 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 FAHD2BQ6P2I3 314 aaPredicted RBP17.09■□□□□ 0.33
FOXC1-201ENST00000380874 FBXO17Q96EF6 278 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 FAHD2AQ96GK7 314 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 PILRBQ9UKJ0 227 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 ST3GAL6Q9Y274 331 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 ADAM10O14672 748 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 SLC25A4P12235 298 aa17.09■□□□□ 0.33
FOXC1-201ENST00000380874 ENDOGQ14249 297 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms