RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ACKR4Q9NPB9 350 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 HPF1Q9NWY4 346 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 DKKL1Q9UK85 242 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 NCOA6Q14686 2063 aaPredicted RBP14.29□□□□□ -0.12
VPS16-203ENST00000380469 H7C2Y5 167 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 RRP8O43159 456 aaKnown RBP14.29□□□□□ -0.12
VPS16-203ENST00000380469 CELA2AP08217 269 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 TMEM225BP0DP42 221 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 ADCYAP1P18509 176 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 IL15RAQ13261 267 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 C10orf91Q5T1B1 145 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 Q6ZSR3 168 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 FOXRED2Q8IWF2 684 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 SULF2Q8IWU5 870 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 TMEM123Q8N131 208 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 ADAMTS17Q8TE56 1095 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 JSRP1Q96MG2 331 aaPredicted RBP14.29□□□□□ -0.12
VPS16-203ENST00000380469 UCN2Q96RP3 112 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 ZNF2Q9BSG1 426 aaPredicted RBP14.29□□□□□ -0.12
VPS16-203ENST00000380469 ANGPTL4Q9BY76 406 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 ULBP2Q9BZM5 246 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 NDRG3Q9UGV2 375 aa14.29□□□□□ -0.12
VPS16-203ENST00000380469 CARHSP1Q9Y2V2 147 aaKnown RBP14.29□□□□□ -0.12
VPS16-203ENST00000380469 MED12Q93074 2177 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 LOC102723996A0A087X1L8 192 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 K7ESF4 209 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 DBHP09172 617 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 LIFP15018 202 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 OTX1P32242 354 aaPredicted RBP14.28□□□□□ -0.12
VPS16-203ENST00000380469 PTGER4P35408 488 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 MTCP1P56278 107 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 SRSF3P84103 164 aaKnown RBP14.28□□□□□ -0.12
VPS16-203ENST00000380469 TMEM200AQ86VY9 491 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 LDLRAD3Q86YD5 345 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 MAML2Q8IZL2 1156 aaPredicted RBP14.28□□□□□ -0.12
VPS16-203ENST00000380469 TAF9BQ9HBM6 251 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 MCTS1Q9ULC4 181 aaKnown RBP14.28□□□□□ -0.12
VPS16-203ENST00000380469 EML6Q6ZMW3 1958 aa14.28□□□□□ -0.12
VPS16-203ENST00000380469 IGHV1-45A0A0A0MS14 117 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 SNAPINO95295 136 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 CD63P08962 238 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 CCL3P10147 92 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 RBM39Q14498 530 aaKnown RBP14.27□□□□□ -0.12
VPS16-203ENST00000380469 SMCO1Q147U7 214 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 EXT1Q16394 746 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 IAH1Q2TAA2 248 aaPredicted RBP14.27□□□□□ -0.12
VPS16-203ENST00000380469 LYSMD4Q5XG99 296 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 H3F3CQ6NXT2 135 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 OR4A4PQ8NGN8 299 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 SAP25Q8TEE9 199 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 SGK3Q96BR1 496 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 METTL9Q9H1A3 318 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 HRH4Q9H3N8 390 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 GPR173Q9NS66 373 aa14.27□□□□□ -0.12
VPS16-203ENST00000380469 IFNA21P01568 189 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 CTSDP07339 412 aaPredicted RBP14.27□□□□□ -0.13
VPS16-203ENST00000380469 FGF5P12034 268 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 SSR4P51571 173 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 MST1LQ2TV78 715 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 TMEM88Q6PEY1 159 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 FAM219AQ8IW50 185 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 FNDC9Q8TBE3 224 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 CPNE2Q96FN4 548 aaPredicted RBP14.27□□□□□ -0.13
VPS16-203ENST00000380469 Q96M66 194 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 SEC11CQ9BY50 192 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 CNTNAP3Q9BZ76 1288 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 UQCC1Q9NVA1 299 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 EDARQ9UNE0 448 aa14.27□□□□□ -0.13
VPS16-203ENST00000380469 IGKV1D-8A0A087WSZ0 117 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 DHRS7CA6NNS2 312 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 ZIC3O60481 467 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 KLK3P07288 261 aaPredicted RBP14.26□□□□□ -0.13
VPS16-203ENST00000380469 HKR1P10072 659 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 IL11RAQ14626 422 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 RSU1Q15404 277 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 FAM27BQ5VT28 67 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 RPL7L1Q6DKI1 246 aaKnown RBP14.26□□□□□ -0.13
VPS16-203ENST00000380469 RPUSD3Q6P087 351 aaKnown RBP14.26□□□□□ -0.13
VPS16-203ENST00000380469 PLXDC2Q6UX71 529 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 DTX1Q86Y01 620 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 NAT6Q93015 286 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 FBXO17Q96EF6 278 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 SMIM8Q96KF7 97 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 ZNF700Q9H0M5 742 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 TLNRD1Q9H1K6 362 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 FOXD3Q9UJU5 478 aaPredicted RBP14.26□□□□□ -0.13
VPS16-203ENST00000380469 PTRH2Q9Y3E5 179 aaKnown RBP14.26□□□□□ -0.13
VPS16-203ENST00000380469 PMS2P1A4D2B8 440 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 H2AFB1P0C5Y9 115 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 SUCLG1P53597 346 aaKnown RBP14.26□□□□□ -0.13
VPS16-203ENST00000380469 CHAF1BQ13112 559 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 C20orf196Q8IYI0 205 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 TMEM156Q8N614 296 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 ESX1Q8N693 406 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 MR1Q95460 341 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 CLDN23Q96B33 292 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 SPSB1Q96BD6 273 aa14.26□□□□□ -0.13
VPS16-203ENST00000380469 IMMP1LQ96LU5 166 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms