RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 OR5D18Q8NGL1 313 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 PECRQ9BY49 303 aa20.09■□□□□ 0.81
VPS16-201ENST00000380443 TMEM225BP0DP42 221 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 HLA-GP17693 338 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 SERPINA2P20848 420 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 NFYAP23511 347 aaPredicted RBP20.08■□□□□ 0.8
VPS16-201ENST00000380443 SRSF4Q08170 494 aaKnown RBP20.08■□□□□ 0.8
VPS16-201ENST00000380443 DHRS2Q13268 280 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 C11orf88Q6PI97 169 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 LYG2Q86SG7 212 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 PXT1Q8NFP0 134 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 TERB2Q8NHR7 220 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 Q96M66 194 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 LDAHQ9H6V9 325 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 HEXA-AS1Q9H8Q6 139 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 B3GNT2Q9NY97 397 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 IL36GQ9NZH8 169 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 KCNN3Q9UGI6 736 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 ZNF175Q9Y473 711 aa20.08■□□□□ 0.8
VPS16-201ENST00000380443 TRGV5A0A0B4J1U4 118 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 IFNA7P01567 189 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 CSN2P05814 226 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 ZBTB25P24278 435 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 HTR2BP41595 481 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 LIN54Q6MZP7 749 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 ZNF552Q9H707 407 aaPredicted RBP20.07■□□□□ 0.8
VPS16-201ENST00000380443 ZDHHC11Q9H8X9 412 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 ELL3Q9HB65 397 aaPredicted RBP20.07■□□□□ 0.8
VPS16-201ENST00000380443 HSF4Q9ULV5 492 aa20.07■□□□□ 0.8
VPS16-201ENST00000380443 TSC22D2O75157 780 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 RAD51DO75771 328 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 TOXO94900 526 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 CSTBP04080 98 aaKnown RBP20.06■□□□□ 0.8
VPS16-201ENST00000380443 H2BFSP57053 126 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 ZNF92Q03936 586 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 RSU1Q15404 277 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 NSUN5P2Q63ZY6 315 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 OR5H2Q8NGV7 314 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 FBXW5Q969U6 566 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 OPA3Q9H6K4 179 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 MSRB2Q9Y3D2 182 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 SPTBN2O15020 2390 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 A6NL46 340 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 PMP2P02689 132 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 SERPINA5P05154 406 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 ZNF35P13682 527 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 CD34P28906 385 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 FGL1Q08830 312 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 MICBQ29980 383 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 CPEB3Q8NE35 698 aaKnown RBP20.06■□□□□ 0.8
VPS16-201ENST00000380443 ZNF680Q8NEM1 530 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 WDYHV1Q96HA8 205 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 ASCL3Q9NQ33 180 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 EDARQ9UNE0 448 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 PTPRBP23467 1997 aa20.06■□□□□ 0.8
VPS16-201ENST00000380443 CNTRLQ7Z7A1 2325 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 M0R233 179 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 IGHV3-9P01782 118 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 HLA-AP01891 365 aaKnown RBP20.05■□□□□ 0.8
VPS16-201ENST00000380443 AMY2BP19961 511 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 SPINK2P20155 84 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 MITD1Q8WV92 249 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 MRGPRFQ96AM1 343 aa20.05■□□□□ 0.8
VPS16-201ENST00000380443 FAM230AA0A1W2PPH8 454 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 MCRIP1C9JLW8 97 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 L7N2F9 121 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 TNFSF10P50591 281 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 SEC61A1P61619 476 aaKnown RBP20.04■□□□□ 0.8
VPS16-201ENST00000380443 MALLQ13021 153 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 C2orf68Q2NKX9 166 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 ZSCAN4Q8NAM6 433 aaPredicted RBP20.04■□□□□ 0.8
VPS16-201ENST00000380443 PHB2Q99623 299 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 EDN3P14138 238 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 ECI1P42126 302 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 OR3A3P47888 321 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 OR3A2P47893 321 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 PLP2Q04941 152 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 TGIF1Q15583 401 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 ATP1A1-AS1Q5TC04 95 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 OR5M8Q8NGP6 311 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 OR10K1Q8NGX5 313 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 APOBEC3DQ96AK3 386 aaPredicted RBP20.04■□□□□ 0.8
VPS16-201ENST00000380443 GLRX2Q9NS18 164 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 PLEKHJ1Q9NW61 149 aa20.04■□□□□ 0.8
VPS16-201ENST00000380443 NOP16Q9Y3C1 178 aaKnown RBP20.04■□□□□ 0.8
VPS16-201ENST00000380443 MED13Q9UHV7 2174 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 C9orf170A2RU37 121 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 OR2AT4A6NND4 320 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 CD8AP01732 235 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 OPCMLQ14982 345 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 GRK1Q15835 563 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 IGFL2Q6UWQ7 119 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 TMEM185AQ8NFB2 350 aa20.03■□□□□ 0.8
VPS16-201ENST00000380443 REPIN1Q9BWE0 567 aaKnown RBP20.03■□□□□ 0.8
VPS16-201ENST00000380443 EFSO43281 561 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 HTR3BO95264 441 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 SIX6O95475 246 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 DUS4LO95620 317 aaKnown RBP20.02■□□□□ 0.8
VPS16-201ENST00000380443 FPR2P25090 351 aa20.02■□□□□ 0.8
VPS16-201ENST00000380443 AGTR1P30556 359 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms