RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 HSPB3Q12988 150 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 COL9A2Q14055 689 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM41BQ5BJD5 291 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 VN1R3Q9BXE9 311 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 WSB1Q9Y6I7 421 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF106Q9H2Y7 1883 aaKnown RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 SCN8AQ9UQD0 1980 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 A0A1W2PS29 197 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 GAGE12BA1L429 117 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF891A8MT65 544 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 PROB1E7EW31 1015 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 RAB29O14966 203 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 SYNGR4O95473 234 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 KLK1P06870 262 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 ACRV1P26436 265 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 IMPA1P29218 277 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 RPL12P30050 165 aaKnown RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 BUD31P41223 144 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 RHOGP84095 191 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 COX15Q7KZN9 410 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 LRRC70Q7Z2Q7 622 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM229BQ8NBD8 167 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 SLC41A2Q96JW4 573 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 CD180Q99467 661 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 HCAR1Q9BXC0 346 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 SLC35D1Q9NTN3 355 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM106BQ9NUM4 274 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 ODAMA1E959 279 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 LEFTY1O75610 366 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TOX4O94842 621 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 MAPK8P45983 427 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 PRLHRP49683 370 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 RND3P61587 244 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 CDK3Q00526 305 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TMEM150AQ86TG1 271 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 RAB11FIP5Q9BXF6 653 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF586Q9NXT0 402 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 STRAPQ9Y3F4 350 aaKnown RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 TBL2Q9Y4P3 447 aaKnown RBP8.3□□□□□ -1.08
PTPRA-204ENST00000380393 WIPI2Q9Y4P8 454 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 LIPGQ9Y5X9 500 aa8.3□□□□□ -1.08
PTPRA-204ENST00000380393 IGLV3-10A0A075B6K4 115 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 A0A1B0GW64 132 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 FRS3O43559 492 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 RBMXL2O75526 392 aaKnown RBP8.29□□□□□ -1.08
PTPRA-204ENST00000380393 IGSF6O95976 241 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ANOS1P23352 680 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 FAM220AQ7Z4H9 259 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 IL22RA1Q8N6P7 574 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ADAD2Q8NCV1 583 aaKnown RBP8.29□□□□□ -1.08
PTPRA-204ENST00000380393 CXorf40AQ8TE69 158 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ZFYVE21Q9BQ24 234 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 P4HTMQ9NXG6 502 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ABI3Q9P2A4 366 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 MSRAQ9UJ68 235 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 B4DGG1 531 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ETV2O00321 342 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-204ENST00000380393 RBFOX2O43251 390 aaKnown RBP eCLIP8.29□□□□□ -1.083e-8■■■■■ 34.2
PTPRA-204ENST00000380393 B4GALT2O60909 372 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 C8AP07357 584 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 BLKP51451 505 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 EFNB2P52799 333 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 SIRPAP78324 504 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 CLEC12BQ2HXU8 276 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ACOT6Q3I5F7 207 aaPredicted RBP8.29□□□□□ -1.08
PTPRA-204ENST00000380393 C9orf50Q5SZB4 431 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 KREMEN2Q8NCW0 462 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 POM121L2Q96KW2 1035 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 MACROD1Q9BQ69 325 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ELOVL5Q9NYP7 299 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 PPP1R3CQ9UQK1 317 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 MPZL1O95297 269 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 LIPFP07098 398 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 SEC11BP0C7V7 166 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF735P0CB33 412 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 CT45A8P0DMV1 189 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 CT45A9P0DMV2 189 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 LYL1P12980 280 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 FXYD6P3P58550 94 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 CCL20P78556 96 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 ZNF92Q03936 586 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 SMAGPQ0VAQ4 97 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 FOXF1Q12946 379 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 CT45A2Q5DJT8 189 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 D2HGDHQ8N465 521 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 RFLNBQ8N5W9 214 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 UBTD2Q8WUN7 234 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 PELI1Q96FA3 418 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 KIAA1671Q9BY89 1806 aa8.29□□□□□ -1.08
PTPRA-204ENST00000380393 SERPINA7P05543 415 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 CHRM2P08172 466 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 PPIAL4GP0DN37 164 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 UCP1P25874 307 aa8.28□□□□□ -1.08
PTPRA-204ENST00000380393 CNN1P51911 297 aaKnown RBP8.28□□□□□ -1.08
PTPRA-204ENST00000380393 MANFP55145 182 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms