RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 RABIFP47224 123 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 SCAND1P57086 179 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 LINC01555Q8NAE3 123 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 OR52R1Q8NGF1 315 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 OR6N2Q8NGY6 317 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 MACROD1Q9BQ69 325 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 FRRS1LQ9P0K9 344 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 GNG13Q9P2W3 67 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 ZNF107Q9UII5 783 aaPredicted RBP7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 PDCD11Q14690 1871 aaKnown RBP7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 SSC5DA1L4H1 1573 aa7.54□□□□□ -1.2
NHLRC3-201ENST00000379599 CASP8AP2Q9UKL3 1982 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 MAP1LC3B2A6NCE7 125 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 GLOD5A6NK44 160 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 METTL12A8MUP2 240 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 H7BYZ3 331 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 K7N7A8 449 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 SLC17A2O00624 439 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 OR7C2O60412 319 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 TMEM225BP0DP42 221 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CTSAP10619 480 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 KRTDAPP60985 99 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 EXOSC7Q15024 291 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 METRNLQ641Q3 311 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 SLCO4C1Q6ZQN7 724 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 C16orf82Q7Z2V1 217 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 OR52L2PQ8NGH6 319 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 OR7D2Q96RA2 312 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ARHGDIGQ99819 225 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 MAP1LC3BQ9GZQ8 125 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 TMEM242Q9NWH2 141 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 MCM3APO60318 1980 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 FAM230AA0A1W2PPH8 454 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ODAMA1E959 279 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ZFP92A6NM28 416 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 E5RGE8 158 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CORTO00230 105 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 GDF9O60383 454 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 HIST1H1CP16403 213 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 MLF1P58340 268 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 FAM3BP58499 235 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 PNRC1Q12796 327 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CNN3Q15417 329 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 Q6ZWC4 215 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CALHM1Q8IU99 346 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 D2HGDHQ8N465 521 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 OR10W1Q8NGF6 305 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 OR5AR1Q8NGP9 310 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 FNDC9Q8TBE3 224 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 PTPMT1Q8WUK0 201 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ZNRF4Q8WWF5 429 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 TIFAQ96CG3 184 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ZNF48Q96MX3 618 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 NICN1Q9BSH3 213 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 BCL2L10Q9HD36 194 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 PRSS16Q9NQE7 514 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ZNF586Q9NXT0 402 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ADAM29Q9UKF5 820 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 YIPF1Q9Y548 306 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 PLXNA3P51805 1871 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 THSD7AQ9UPZ6 1657 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 NPIPA5A0A0B4J1W7 369 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CLEC18AA5D8T8 446 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ZNF891A8MT65 544 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 PRR32B1ATL7 298 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 B4DGG1 531 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 C1QTNF3-AMACRE9PGA6 284 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 F5H5T6 163 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 SLC25A17O43808 307 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 NCBP2P52298 156 aaKnown RBP eCLIP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ARF6P62330 175 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CXCL9Q07325 125 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 SPSB3Q6PJ21 355 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 C1orf122Q6ZSJ8 110 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CLEC18CQ8NCF0 446 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CADM4Q8NFZ8 388 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 GABRG3Q99928 467 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 CCDC3Q9BQI4 270 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 C5orf66Q9H5L9 145 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 ELL3Q9HB65 397 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 FLRT3Q9NZU0 649 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 SLC45A2Q9UMX9 530 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 IER3IP1Q9Y5U9 82 aa7.53□□□□□ -1.2
NHLRC3-201ENST00000379599 H3BRB1 525 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 ETV2O00321 342 aaPredicted RBP7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 DEDDO75618 318 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 PDGFBP01127 241 aaPredicted RBP7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 RBMXP38159 391 aaKnown RBP7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 TPPP2P59282 170 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 RHOAP61586 193 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 SLAQ13239 276 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 ZNF506Q5JVG8 444 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 NRSN1Q8IZ57 195 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 FAM46BQ96A09 425 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 TMEM230Q96A57 120 aa7.52□□□□□ -1.21
NHLRC3-201ENST00000379599 GPR146Q96CH1 333 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms