RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 KCTD21Q4G0X4 260 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 SPARTQ8N0X7 666 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 LRRC29Q8WV35 223 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 AQP3Q92482 292 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 ZNF469Q96JG9 3925 aaPredicted RBP15.72■□□□□ 0.11
SSU72-203ENST00000378725 IGKV1-27A0A075B6S5 117 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 hCG_1807616A0A1W2PRN6 198 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 SRRM5B3KS81 715 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 RHBDL1O75783 438 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 ZNF205O95201 554 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 CD2P06729 351 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 MPZP25189 248 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 IL2RGP31785 369 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 HAAOP46952 286 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 SOX2P48431 317 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 HOXA4Q00056 320 aaPredicted RBP15.71■□□□□ 0.11
SSU72-203ENST00000378725 MLLT11Q13015 90 aaPredicted RBP15.71■□□□□ 0.11
SSU72-203ENST00000378725 ZNF404Q494X3 552 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 Q499Y3 187 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 ASPHD2Q6ICH7 369 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 BIVMQ86UB2 503 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 MUC20Q8N307 709 aaPredicted RBP15.71■□□□□ 0.11
SSU72-203ENST00000378725 OR13C5Q8NGS8 318 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 ZNF671Q8TAW3 534 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 TRMT10AQ8TBZ6 339 aaKnown RBP15.71■□□□□ 0.11
SSU72-203ENST00000378725 TMEM106AQ96A25 262 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 SPSB1Q96BD6 273 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 MGLLQ99685 303 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 PKIBQ9C010 78 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 NARFLQ9H6Q4 476 aa15.71■□□□□ 0.11
SSU72-203ENST00000378725 FAM230AA0A1W2PPH8 454 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 ISPDA4D126 451 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.7■□□□□ 0.1
SSU72-203ENST00000378725 J3QT63 122 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 LGALS8O00214 317 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 TNFRSF13BO14836 293 aaPredicted RBP15.7■□□□□ 0.1
SSU72-203ENST00000378725 NOS1APO75052 506 aaPredicted RBP15.7■□□□□ 0.1
SSU72-203ENST00000378725 IGHV2-5P01817 119 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 ACAA1P09110 424 aaPredicted RBP15.7■□□□□ 0.1
SSU72-203ENST00000378725 IGHV4-31P0DP07 118 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 EGR1P18146 543 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 PCMT1P22061 227 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 CPT2P23786 658 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 AZGP1P25311 298 aaKnown RBP15.7■□□□□ 0.1
SSU72-203ENST00000378725 KRTAP1-1Q07627 177 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 TEX36Q5VZQ5 186 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 HAGHLQ6PII5 290 aaPredicted RBP15.7■□□□□ 0.1
SSU72-203ENST00000378725 UNQ9370/PRO34162Q6UXP9 181 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 ZNF367Q7RTV3 350 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 ANGPTL5Q86XS5 388 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 SVOPQ8N4V2 548 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 SPICQ8N5J4 248 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 MS4A15Q8N5U1 240 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 OR13C9Q8NGT0 318 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 NPRL2Q8WTW4 380 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 BORCS8Q96FH0 119 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 OPALINQ96PE5 141 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 SMR3AQ99954 134 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 GAL3ST1Q99999 423 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 TMEM246Q9BRR3 403 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 ZNF665Q9H7R5 613 aa15.7■□□□□ 0.1
SSU72-203ENST00000378725 MAP1AP78559 2803 aaPredicted RBP15.69■□□□□ 0.1
SSU72-203ENST00000378725 TRBV5-7A0A0A0MS05 114 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 OOEPA6NGQ2 149 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 ZNF879B4DU55 563 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 SULT1B1O43704 296 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 GPX5O75715 221 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 HEXAP06865 529 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 HSMCR30P0CW71 290 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 CPEP16870 476 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 GZMKP49863 264 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 RBP2P50120 134 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 ATP1B3P54709 279 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 IL24Q13007 206 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 SFRP4Q6FHJ7 346 aaPredicted RBP15.69■□□□□ 0.1
SSU72-203ENST00000378725 ZNF773Q6PK81 442 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 LHFPL2Q6ZUX7 228 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 CALHM1Q8IU99 346 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 BOLLQ8N9W6 283 aaKnown RBP15.69■□□□□ 0.1
SSU72-203ENST00000378725 UFD1Q92890 307 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 PATZ1Q9HBE1 687 aaKnown RBP15.69■□□□□ 0.1
SSU72-203ENST00000378725 NEK6Q9HC98 313 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 LRCH1Q9Y2L9 728 aa15.69■□□□□ 0.1
SSU72-203ENST00000378725 HIVEP1P15822 2718 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 TRAV38-1A0A0B4J264 116 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 F5H0A9 414 aaPredicted RBP15.68■□□□□ 0.1
SSU72-203ENST00000378725 AKR7A2O43488 359 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 SYNGR1O43759 233 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 LY6G6DO95868 133 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 WNT2P09544 360 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 MUC1P15941 1255 aaPredicted RBP15.68■□□□□ 0.1
SSU72-203ENST00000378725 IGFBP3P17936 291 aaPredicted RBP15.68■□□□□ 0.1
SSU72-203ENST00000378725 CD80P33681 288 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 MTCP1P56278 107 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 KCNJ8Q15842 424 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 UBE2UQ5VVX9 321 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 LIPKQ5VXJ0 399 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 CYB5R2Q6BCY4 276 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 CRIP3Q6Q6R5 217 aa15.68■□□□□ 0.1
SSU72-203ENST00000378725 PHC2Q8IXK0 858 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms